myRT

myRT report for GCA_001031945.1_Kleb_pneu_CHS148_V1

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Seq: KQ088541.1 Klebsiella pneumoniae strain CHS148 genomic scaffold aetgU-supercont1.1, whole genome shotgun sequence (4801846 bp)
Overview 1 RT 1: 1032314-1037919 bp 2 RT 2: 1375534-1380952 bp 3 RT 3: 1564196-1569488 bp 4 RT 4: 2892598-2899081 bp Neighborhood of RT #1 [1032314, 1037945] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1375534, 1380954] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1564196, 1569490] PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2892598, 2899083] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1032314-1032877 bp Feature: domain Description: YbjK Location: 1032320-1032857 bp Feature: domain Description: YbjK Location: 1 032320-1 032857 bp Feature: gene Location: 1033000-1034052 bp Feature: domain Description: int Location: 1033003-1034002 bp Feature: domain Description: int Location: 1 033003-1 034002 bp Feature: gene Location: 1034468-1035955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034873-1035563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 034873-1 035563 bp Feature: gene Location: 1036054-1036998 bp Feature: gene Location: 1037010-1037945 bp Feature: domain Description: Phage_CI_repr Location: 1037094-1037277 bp Feature: domain Description: Phage_CI_repr Location: 1 037094-1 037277 bp Feature: domain Description: Phage_CI_repr Location: 1037406-1037598 bp Feature: domain Description: Phage_CI_repr Location: 1 037406-1 037598 bp Feature: domain Description: Phage_CI_C Location: 1037625-1037919 bp Feature: domain Description: Phage_CI_C Location: 1 037625-1 03791 9 bp Feature: gene Location: 1375534-1376673 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375717-1376617 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 37571 7-1 37661 7 bp Feature: gene Location: 1376844-1377086 bp Feature: domain Description: DinI Location: 1376895-1377075 bp Feature: domain Description: DinI Location: 1 376895-1 377075 bp Feature: gene Location: 1377701-1379188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378106-1378796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3781 06-1 378796 bp Feature: gene Location: 1379267-1379686 bp Feature: domain Description: PRK10276 Location: 1379270-1379681 bp Feature: domain Description: PRK1 0276 Location: 1 379270-1 379681 bp Feature: gene Location: 1379689-1380954 bp Feature: domain Description: umuC Location: 1379692-1380952 bp Feature: domain Description: umuC Location: 1 379692-1 380952 bp Feature: gene Location: 1564196-1564327 bp Feature: gene Location: 1564393-1564842 bp Feature: domain Description: PinE Location: 1564402-1564834 bp Feature: domain Description: PinE Location: 1 564402-1 564834 bp Feature: gene Location: 1566237-1567724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1566642-1567332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 566642-1 567332 bp Feature: gene Location: 1567717-1568223 bp Feature: domain Description: PRK10276 Location: 1567807-1568218 bp Feature: domain Description: PRK1 0276 Location: 1 567807-1 56821 8 bp Feature: gene Location: 1568225-1569490 bp Feature: domain Description: umuC Location: 1568228-1569488 bp Feature: domain Description: umuC Location: 1 568228-1 569488 bp Feature: gene Location: 2892598-2893656 bp Feature: domain Description: YccC Location: 2892604-2893642 bp Feature: domain Description: YccC Location: 2892604-2893642 bp Feature: gene Location: 2893755-2894228 bp Feature: domain Description: PRK10016 Location: 2893758-2894217 bp Feature: domain Description: PRK1 001 6 Location: 2893758-289421 7 bp Feature: gene Location: 2894310-2895797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894715-2895405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289471 5-2895405 bp Feature: gene Location: 2896315-2897478 bp Feature: domain Description: dacD Location: 2896318-2897473 bp Feature: domain Description: dacD Location: 289631 8-2897473 bp Feature: gene Location: 2897659-2899083 bp Feature: domain Description: SbcB Location: 2897665-2899081 bp Feature: domain Description: SbcB Location: 2897665-2899081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088544.1 Klebsiella pneumoniae strain CHS148 genomic scaffold aetgU-supercont1.4, whole genome shotgun sequence (173552 bp)
Overview 1 RT 1: 116486-121480 bp Neighborhood of RT #1 [116486, 121482] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 116486-117757 bp Feature: domain Description: umuC Location: 116489-117752 bp Feature: domain Description: umuC Location: 116489-117752 bp Feature: gene Location: 117757-118182 bp Feature: domain Description: PRK10276 Location: 117760-118168 bp Feature: domain Description: PRK102 76 Location: 117760-118168 bp Feature: gene Location: 118585-120072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118990-119680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118990-119680 bp Feature: gene Location: 120306-120536 bp Feature: gene Location: 121057-121482 bp Feature: domain Description: Antirestrict Location: 121192-121480 bp Feature: domain Description: Antirestrict Location: 12 1192 -12 1480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)