myRT

myRT report for GCA_001031955.1_Kleb_pneu_CHS150_V1

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Seq: KQ088549.1 Klebsiella pneumoniae strain CHS150 genomic scaffold aetyN-supercont1.2, whole genome shotgun sequence (2051046 bp)
Overview 1 RT 1: 584146-587553 bp 2 RT 2: 1026698-1032303 bp 3 RT 3: 1370082-1375500 bp 4 RT 4: 1555112-1560467 bp Neighborhood of RT #1 [584146, 587654] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026698, 1032329] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370082, 1375502] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555112, 1560469] DDE_Tnp_IS240 PinE RVT-GII PRK10276 umuC Feature: gene Location: 584146-584877 bp Feature: domain Description: Laminin_G_3 Location: 584467-584821 bp Feature: domain Description: Laminin_G_3 Location: 584467-584821 bp Feature: gene Location: 584874-585083 bp Feature: gene Location: 585533-587020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585938-586628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585938-586628 bp Feature: gene Location: 587098-587337 bp Feature: gene Location: 587337-587654 bp Feature: domain Description: PRK10276 Location: 587343-587457 bp Feature: domain Description: PRK1 0276 Location: 587343-587457 bp Feature: domain Description: PRK10276 Location: 587484-587553 bp Feature: domain Description: PRK1 0276 Location: 587484-587553 bp Feature: gene Location: 1026698-1027261 bp Feature: domain Description: YbjK Location: 1026704-1027241 bp Feature: domain Description: YbjK Location: 1 026704-1 027241 bp Feature: gene Location: 1027384-1028436 bp Feature: domain Description: int Location: 1027387-1028386 bp Feature: domain Description: int Location: 1 027387-1 028386 bp Feature: gene Location: 1028852-1030339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029257-1029947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029257-1 029947 bp Feature: gene Location: 1030438-1031382 bp Feature: gene Location: 1031394-1032329 bp Feature: domain Description: Phage_CI_repr Location: 1031478-1031661 bp Feature: domain Description: Phage_CI_repr Location: 1 031 478-1 031 661 bp Feature: domain Description: Phage_CI_repr Location: 1031790-1031982 bp Feature: domain Description: Phage_CI_repr Location: 1 031 790-1 031 982 bp Feature: domain Description: Phage_CI_C Location: 1032009-1032303 bp Feature: domain Description: Phage_CI_C Location: 1 032009-1 032303 bp Feature: gene Location: 1370082-1371221 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370265-1371165 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370265-1 371 1 65 bp Feature: gene Location: 1371392-1371634 bp Feature: domain Description: DinI Location: 1371443-1371623 bp Feature: domain Description: DinI Location: 1 371 443-1 371 623 bp Feature: gene Location: 1372249-1373736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372654-1373344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372654-1 373344 bp Feature: gene Location: 1373815-1374234 bp Feature: domain Description: PRK10276 Location: 1373818-1374229 bp Feature: domain Description: PRK1 0276 Location: 1 37381 8-1 374229 bp Feature: gene Location: 1374237-1375502 bp Feature: domain Description: umuC Location: 1374240-1375500 bp Feature: domain Description: umuC Location: 1 374240-1 375500 bp Feature: gene Location: 1555112-1555306 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1555118-1555238 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1 5551 1 8-1 555238 bp Feature: gene Location: 1555372-1555821 bp Feature: domain Description: PinE Location: 1555381-1555813 bp Feature: domain Description: PinE Location: 1 555381 -1 55581 3 bp Feature: gene Location: 1557216-1558703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557621-1558311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557621 -1 55831 1 bp Feature: gene Location: 1558696-1559202 bp Feature: domain Description: PRK10276 Location: 1558786-1559197 bp Feature: domain Description: PRK1 0276 Location: 1 558786-1 5591 97 bp Feature: gene Location: 1559204-1560469 bp Feature: domain Description: umuC Location: 1559207-1560467 bp Feature: domain Description: umuC Location: 1 559207-1 560467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
DDE_Tnp_IS240 (pfam13610), PinE (COG1961)

Seq: KQ088548.1 Klebsiella pneumoniae strain CHS150 genomic scaffold aetyN-supercont1.1, whole genome shotgun sequence (3544396 bp)
Overview 1 RT 1: 886371-892854 bp Neighborhood of RT #1 [886371, 892856] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886371-887429 bp Feature: domain Description: YccC Location: 886377-887415 bp Feature: domain Description: YccC Location: 886377-887415 bp Feature: gene Location: 887528-888001 bp Feature: domain Description: PRK10016 Location: 887531-887990 bp Feature: domain Description: PRK10016 Location: 887531-887990 bp Feature: gene Location: 888083-889570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888488-889178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888488-889178 bp Feature: gene Location: 890088-891251 bp Feature: domain Description: dacD Location: 890091-891246 bp Feature: domain Description: dacD Location: 890091-8912 46 bp Feature: gene Location: 891432-892856 bp Feature: domain Description: SbcB Location: 891438-892854 bp Feature: domain Description: SbcB Location: 891438-892 854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088550.1 Klebsiella pneumoniae strain CHS150 genomic scaffold aetyN-supercont1.3, whole genome shotgun sequence (153013 bp)
Overview 1 RT 1: 21441-26435 bp Neighborhood of RT #1 [21441, 26437] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 21441-22712 bp Feature: domain Description: umuC Location: 21444-22707 bp Feature: domain Description: umuC Location: 21444-22707 bp Feature: gene Location: 22712-23137 bp Feature: domain Description: PRK10276 Location: 22715-23123 bp Feature: domain Description: PRK10276 Location: 22715-23 123 bp Feature: gene Location: 23540-25027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23945-24635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 945-2463 5 bp Feature: gene Location: 25261-25491 bp Feature: gene Location: 26012-26437 bp Feature: domain Description: Antirestrict Location: 26147-26435 bp Feature: domain Description: Antirestrict Location: 26147-2643 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088551.1 Klebsiella pneumoniae strain CHS150 genomic scaffold aetyN-supercont1.4, whole genome shotgun sequence (73954 bp)
Overview 1 RT 1: 14418-19771 bp Neighborhood of RT #1 [14418, 19908] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 14418-15689 bp Feature: domain Description: umuC Location: 14421-15681 bp Feature: domain Description: umuC Location: 14 4 21-15681 bp Feature: gene Location: 15689-16120 bp Feature: domain Description: PRK10276 Location: 15740-16103 bp Feature: domain Description: PRK10276 Location: 1574 0-16103 bp Feature: gene Location: 16203-17690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16608-17298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16608-17298 bp Feature: gene Location: 18263-19234 bp Feature: domain Description: StbA Location: 18266-19211 bp Feature: domain Description: StbA Location: 18266-19211 bp Feature: gene Location: 19237-19908 bp Feature: domain Description: Plasmid_stab_B Location: 19252-19459 bp Feature: domain Description: Plasmid_stab_B Location: 19252-194 59 bp Feature: domain Description: Plasmid_stab_B Location: 19564-19771 bp Feature: domain Description: Plasmid_stab_B Location: 19564 -19771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)