myRT

myRT report for GCA_001031995.1_Kleb_pneu_CHS151_V1

Download annotations/find similar RTs

Seq: KQ088559.1 Klebsiella pneumoniae strain CHS151 genomic scaffold aetyW-supercont1.1, whole genome shotgun sequence (5157154 bp)
Overview 1 RT 1: 329786-334261 bp 2 RT 2: 772201-777806 bp 3 RT 3: 1348697-1354562 bp 4 RT 4: 2590079-2596562 bp Neighborhood of RT #1 [329786, 334362] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [772201, 777832] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1348697, 1354564] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2590079, 2596564] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 329786-330517 bp Feature: domain Description: Laminin_G_3 Location: 330107-330461 bp Feature: domain Description: Laminin_G_3 Location: 3301 07-330461 bp Feature: gene Location: 330514-330723 bp Feature: gene Location: 331176-332243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331578-332190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 578-3321 90 bp Feature: gene Location: 333806-334045 bp Feature: gene Location: 334045-334362 bp Feature: domain Description: PRK10276 Location: 334051-334165 bp Feature: domain Description: PRK1 0276 Location: 334051 -3341 65 bp Feature: domain Description: PRK10276 Location: 334192-334261 bp Feature: domain Description: PRK1 0276 Location: 3341 92-334261 bp Feature: gene Location: 772201-772764 bp Feature: domain Description: YbjK Location: 772207-772744 bp Feature: domain Description: YbjK Location: 772207-772744 bp Feature: gene Location: 772887-773939 bp Feature: domain Description: int Location: 772890-773889 bp Feature: domain Description: int Location: 772890-773889 bp Feature: gene Location: 774358-775842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774760-775450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774760-775450 bp Feature: gene Location: 775941-776885 bp Feature: gene Location: 776897-777832 bp Feature: domain Description: Phage_CI_repr Location: 776981-777164 bp Feature: domain Description: Phage_CI_repr Location: 776981 -7771 64 bp Feature: domain Description: Phage_CI_repr Location: 777293-777485 bp Feature: domain Description: Phage_CI_repr Location: 777293-777485 bp Feature: domain Description: Phage_CI_C Location: 777512-777806 bp Feature: domain Description: Phage_CI_C Location: 77751 2-777806 bp Feature: gene Location: 1348697-1349401 bp Feature: domain Description: Rve Location: 1348700-1349345 bp Feature: domain Description: Rve Location: 1 348700-1 349345 bp Feature: gene Location: 1349467-1349916 bp Feature: domain Description: PinE Location: 1349476-1349908 bp Feature: domain Description: PinE Location: 1 349476-1 349908 bp Feature: gene Location: 1351314-1352798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1351716-1352406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 351 71 6-1 352406 bp Feature: gene Location: 1352791-1353297 bp Feature: domain Description: PRK10276 Location: 1352881-1353292 bp Feature: domain Description: PRK1 0276 Location: 1 352881 -1 353292 bp Feature: gene Location: 1353299-1354564 bp Feature: domain Description: umuC Location: 1353302-1354562 bp Feature: domain Description: umuC Location: 1 353302-1 354562 bp Feature: gene Location: 2590079-2591137 bp Feature: domain Description: YccC Location: 2590085-2591123 bp Feature: domain Description: YccC Location: 2590085-2591 1 23 bp Feature: gene Location: 2591236-2591709 bp Feature: domain Description: PRK10016 Location: 2591239-2591698 bp Feature: domain Description: PRK1 001 6 Location: 2591 239-2591 698 bp Feature: gene Location: 2591791-2593275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2592193-2592883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25921 93-2592883 bp Feature: gene Location: 2593796-2594959 bp Feature: domain Description: dacD Location: 2593799-2594954 bp Feature: domain Description: dacD Location: 2593799-2594954 bp Feature: gene Location: 2595140-2596564 bp Feature: domain Description: SbcB Location: 2595146-2596562 bp Feature: domain Description: SbcB Location: 25951 46-2596562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), Rve (COG3316), PinE (COG1961), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)