myRT

myRT report for GCA_001032025.1_Kleb_pneu_CHS152_V1

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Seq: KQ088566.1 Klebsiella pneumoniae strain CHS152 genomic scaffold aetyH-supercont1.2, whole genome shotgun sequence (1443438 bp)
Overview 1 RT 1: 886929-893412 bp Neighborhood of RT #1 [886929, 893414] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886929-887987 bp Feature: domain Description: YccC Location: 886935-887973 bp Feature: domain Description: YccC Location: 886935-887973 bp Feature: gene Location: 888086-888559 bp Feature: domain Description: PRK10016 Location: 888089-888548 bp Feature: domain Description: PRK1 001 6 Location: 888089-888548 bp Feature: gene Location: 888641-890128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889046-889736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889046-889736 bp Feature: gene Location: 890646-891809 bp Feature: domain Description: dacD Location: 890649-891804 bp Feature: domain Description: dacD Location: 890649-891 804 bp Feature: gene Location: 891990-893414 bp Feature: domain Description: SbcB Location: 891996-893412 bp Feature: domain Description: SbcB Location: 891 996-89341 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088571.1 Klebsiella pneumoniae strain CHS152 genomic scaffold aetyH-supercont1.7, whole genome shotgun sequence (140834 bp)
Overview 1 RT 1: 83255-88249 bp Neighborhood of RT #1 [83255, 88251] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 83255-84526 bp Feature: domain Description: umuC Location: 83258-84521 bp Feature: domain Description: umuC Location: 832 58-8452 1 bp Feature: gene Location: 84526-84951 bp Feature: domain Description: PRK10276 Location: 84529-84937 bp Feature: domain Description: PRK102 76 Location: 8452 9-84937 bp Feature: gene Location: 85354-86841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85759-86449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85759-86449 bp Feature: gene Location: 87075-87305 bp Feature: gene Location: 87826-88251 bp Feature: domain Description: Antirestrict Location: 87961-88249 bp Feature: domain Description: Antirestrict Location: 87961-882 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088565.1 Klebsiella pneumoniae strain CHS152 genomic scaffold aetyH-supercont1.1, whole genome shotgun sequence (1712460 bp)
Overview 1 RT 1: 332208-335615 bp 2 RT 2: 702760-708365 bp 3 RT 3: 1045865-1051283 bp 4 RT 4: 1229362-1235227 bp Neighborhood of RT #1 [332208, 335716] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [702760, 708391] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1045865, 1051285] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1229362, 1235229] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 332208-332939 bp Feature: domain Description: Laminin_G_3 Location: 332529-332883 bp Feature: domain Description: Laminin_G_3 Location: 3 3 2529-3 3 2883 bp Feature: gene Location: 332936-333145 bp Feature: gene Location: 333595-335082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334000-334690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 4000-3 3 4690 bp Feature: gene Location: 335160-335399 bp Feature: gene Location: 335399-335716 bp Feature: domain Description: PRK10276 Location: 335405-335519 bp Feature: domain Description: PRK10276 Location: 3 3 5405-3 3 5519 bp Feature: domain Description: PRK10276 Location: 335546-335615 bp Feature: domain Description: PRK10276 Location: 3 3 5546-3 3 5615 bp Feature: gene Location: 702760-703323 bp Feature: domain Description: YbjK Location: 702766-703303 bp Feature: domain Description: YbjK Location: 702766-703 3 03 bp Feature: gene Location: 703446-704498 bp Feature: domain Description: int Location: 703449-704448 bp Feature: domain Description: int Location: 703 449-704448 bp Feature: gene Location: 704914-706401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705319-706009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7053 19-706009 bp Feature: gene Location: 706500-707444 bp Feature: gene Location: 707456-708391 bp Feature: domain Description: Phage_CI_repr Location: 707540-707723 bp Feature: domain Description: Phage_CI_repr Location: 707540-707723 bp Feature: domain Description: Phage_CI_repr Location: 707852-708044 bp Feature: domain Description: Phage_CI_repr Location: 707852-708044 bp Feature: domain Description: Phage_CI_C Location: 708071-708365 bp Feature: domain Description: Phage_CI_C Location: 708071-7083 65 bp Feature: gene Location: 1045865-1047004 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1046048-1046948 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1046048-1046948 bp Feature: gene Location: 1047175-1047417 bp Feature: domain Description: DinI Location: 1047226-1047406 bp Feature: domain Description: DinI Location: 1047226-1047406 bp Feature: gene Location: 1048032-1049519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1048437-1049127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104843 7-1049127 bp Feature: gene Location: 1049598-1050017 bp Feature: domain Description: PRK10276 Location: 1049601-1050012 bp Feature: domain Description: PRK10276 Location: 1049601-1050012 bp Feature: gene Location: 1050020-1051285 bp Feature: domain Description: umuC Location: 1050023-1051283 bp Feature: domain Description: umuC Location: 1050023 -1051283 bp Feature: gene Location: 1229362-1230066 bp Feature: domain Description: Rve Location: 1229365-1230010 bp Feature: domain Description: Rve Location: 12293 65-123 0010 bp Feature: gene Location: 1230132-1230581 bp Feature: domain Description: PinE Location: 1230141-1230573 bp Feature: domain Description: PinE Location: 123 0141-123 0573 bp Feature: gene Location: 1231976-1233463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1232381-1233071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 23 81-123 3 071 bp Feature: gene Location: 1233456-1233962 bp Feature: domain Description: PRK10276 Location: 1233546-1233957 bp Feature: domain Description: PRK10276 Location: 123 3 546-123 3 957 bp Feature: gene Location: 1233964-1235229 bp Feature: domain Description: umuC Location: 1233967-1235227 bp Feature: domain Description: umuC Location: 123 3 967-123 5227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)