myRT

myRT report for GCA_001032045.1_Kleb_pneu_CHS155_V1

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Seq: KQ088590.1 Klebsiella pneumoniae strain CHS155 genomic scaffold aetzD-supercont1.5, whole genome shotgun sequence (173782 bp)
Overview 1 RT 1: 116197-121191 bp Neighborhood of RT #1 [116197, 121193] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 116197-117468 bp Feature: domain Description: umuC Location: 116200-117463 bp Feature: domain Description: umuC Location: 1 1 6200-1 1 7463 bp Feature: gene Location: 117468-117893 bp Feature: domain Description: PRK10276 Location: 117471-117879 bp Feature: domain Description: PRK1 0276 Location: 1 1 7471 -1 1 7879 bp Feature: gene Location: 118296-119783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118701-119391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8701 -1 1 9391 bp Feature: gene Location: 120017-120247 bp Feature: gene Location: 120768-121193 bp Feature: domain Description: Antirestrict Location: 120903-121191 bp Feature: domain Description: Antirestrict Location: 1 20903-1 21 1 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088586.1 Klebsiella pneumoniae strain CHS155 genomic scaffold aetzD-supercont1.1, whole genome shotgun sequence (3216890 bp)
Overview 1 RT 1: 333270-336677 bp 2 RT 2: 775252-780857 bp 3 RT 3: 1119200-1124618 bp 4 RT 4: 1304442-1309734 bp 5 RT 5: 2662877-2669360 bp Neighborhood of RT #1 [333270, 336778] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [775252, 780883] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1119200, 1124620] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1304442, 1309736] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2662877, 2669362] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 333270-334001 bp Feature: domain Description: Laminin_G_3 Location: 333591-333945 bp Feature: domain Description: Laminin_G_3 Location: 333591-333945 bp Feature: gene Location: 333998-334207 bp Feature: gene Location: 334657-336144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335062-335752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335062 -335752 bp Feature: gene Location: 336222-336461 bp Feature: gene Location: 336461-336778 bp Feature: domain Description: PRK10276 Location: 336467-336581 bp Feature: domain Description: PRK102 76 Location: 336467-336581 bp Feature: domain Description: PRK10276 Location: 336608-336677 bp Feature: domain Description: PRK102 76 Location: 336608-336677 bp Feature: gene Location: 775252-775815 bp Feature: domain Description: YbjK Location: 775258-775795 bp Feature: domain Description: YbjK Location: 7752 58-775795 bp Feature: gene Location: 775938-776990 bp Feature: domain Description: int Location: 775941-776940 bp Feature: domain Description: int Location: 775941-776940 bp Feature: gene Location: 777406-778893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777811-778501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777811-778501 bp Feature: gene Location: 778992-779936 bp Feature: gene Location: 779948-780883 bp Feature: domain Description: Phage_CI_repr Location: 780032-780215 bp Feature: domain Description: Phage_CI_repr Location: 780032 -7802 15 bp Feature: domain Description: Phage_CI_repr Location: 780344-780536 bp Feature: domain Description: Phage_CI_repr Location: 780344-780536 bp Feature: domain Description: Phage_CI_C Location: 780563-780857 bp Feature: domain Description: Phage_CI_C Location: 780563-780857 bp Feature: gene Location: 1119200-1120339 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1119383-1120283 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1119383-112 02 83 bp Feature: gene Location: 1120510-1120752 bp Feature: domain Description: DinI Location: 1120561-1120741 bp Feature: domain Description: DinI Location: 112 0561-112 0741 bp Feature: gene Location: 1121367-1122854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1121772-1122462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 1772 -112 2 462 bp Feature: gene Location: 1122933-1123352 bp Feature: domain Description: PRK10276 Location: 1122936-1123347 bp Feature: domain Description: PRK102 76 Location: 112 2 936-112 3347 bp Feature: gene Location: 1123355-1124620 bp Feature: domain Description: umuC Location: 1123358-1124618 bp Feature: domain Description: umuC Location: 112 3358-112 4618 bp Feature: gene Location: 1304442-1304573 bp Feature: gene Location: 1304639-1305088 bp Feature: domain Description: PinE Location: 1304648-1305080 bp Feature: domain Description: PinE Location: 1304648-1305080 bp Feature: gene Location: 1306483-1307970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306888-1307578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306888-1307578 bp Feature: gene Location: 1307963-1308469 bp Feature: domain Description: PRK10276 Location: 1308053-1308464 bp Feature: domain Description: PRK102 76 Location: 1308053-1308464 bp Feature: gene Location: 1308471-1309736 bp Feature: domain Description: umuC Location: 1308474-1309734 bp Feature: domain Description: umuC Location: 1308474-1309734 bp Feature: gene Location: 2662877-2663935 bp Feature: domain Description: YccC Location: 2662883-2663921 bp Feature: domain Description: YccC Location: 2 662 883-2 66392 1 bp Feature: gene Location: 2664034-2664507 bp Feature: domain Description: PRK10016 Location: 2664037-2664496 bp Feature: domain Description: PRK10016 Location: 2 664037-2 664496 bp Feature: gene Location: 2664589-2666076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2664994-2665684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 664994-2 665684 bp Feature: gene Location: 2666594-2667757 bp Feature: domain Description: dacD Location: 2666597-2667752 bp Feature: domain Description: dacD Location: 2 666597-2 667752 bp Feature: gene Location: 2667938-2669362 bp Feature: domain Description: SbcB Location: 2667944-2669360 bp Feature: domain Description: SbcB Location: 2 667944-2 669360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)