myRT

myRT report for GCA_001032105.1_Kleb_pneu_CHS157_V1

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Seq: KQ088614.1 Klebsiella pneumoniae strain CHS157 genomic scaffold aetgv-supercont1.11, whole genome shotgun sequence (80783 bp)
Overview 1 RT 1: 33204-35819 bp Neighborhood of RT #1 [33204, 35956] RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 33204-33738 bp Ori: KMB86993.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33609-33738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33609-33738 bp Feature: gene Location: 34311-35282 bp Ori: KMB86994.1 Feature: domain Description: StbA Location: 34314-35259 bp Feature: domain Description: StbA Location: 3431 4-35259 bp Feature: gene Location: 35285-35956 bp Ori: KMB86995.1 Feature: domain Description: Plasmid_stab_B Location: 35300-35507 bp Feature: domain Description: Plasmid_stab_B Location: 35300-35507 bp Feature: domain Description: Plasmid_stab_B Location: 35612-35819 bp Feature: domain Description: Plasmid_stab_B Location: 3561 2-3581 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088605.1 Klebsiella pneumoniae strain CHS157 genomic scaffold aetgv-supercont1.2, whole genome shotgun sequence (1457787 bp)
Overview 1 RT 1: 439802-445407 bp 2 RT 2: 786897-790920 bp Neighborhood of RT #1 [439802, 445433] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [786897, 790922] RVT-GII PRK10276 umuC Feature: gene Location: 439802-440365 bp Ori: KMB94861.1 Feature: domain Description: YbjK Location: 439808-440345 bp Feature: domain Description: YbjK Location: 439808-440345 bp Feature: gene Location: 440488-441540 bp Ori: KMB94862.1 Feature: domain Description: int Location: 440491-441490 bp Feature: domain Description: int Location: 440491-441490 bp Feature: gene Location: 441956-443443 bp Ori: KMB94863.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442361-443051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 361-443051 bp Feature: gene Location: 443542-444486 bp Feature: gene Location: 444498-445433 bp Ori: KMB94865.1 Feature: domain Description: Phage_CI_repr Location: 444582-444765 bp Feature: domain Description: Phage_CI_repr Location: 444582 -444765 bp Feature: domain Description: Phage_CI_repr Location: 444894-445086 bp Feature: domain Description: Phage_CI_repr Location: 444894-445086 bp Feature: domain Description: Phage_CI_C Location: 445113-445407 bp Feature: domain Description: Phage_CI_C Location: 445113-445407 bp Feature: gene Location: 786897-787013 bp Feature: gene Location: 787010-787219 bp Feature: gene Location: 787669-789156 bp Ori: KMB93957.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788074-788764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788074-788764 bp Feature: gene Location: 789235-789654 bp Ori: KMB93958.1 Feature: domain Description: PRK10276 Location: 789238-789649 bp Feature: domain Description: PRK102 76 Location: 7892 38-789649 bp Feature: gene Location: 789657-790922 bp Ori: KMB93959.1 Feature: domain Description: umuC Location: 789660-790920 bp Feature: domain Description: umuC Location: 789660-79092 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088610.1 Klebsiella pneumoniae strain CHS157 genomic scaffold aetgv-supercont1.7, whole genome shotgun sequence (152279 bp)
Overview 1 RT 1: 134183-139177 bp Neighborhood of RT #1 [134183, 139179] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 134183-135454 bp Ori: KMB89302.1 Feature: domain Description: umuC Location: 134186-135449 bp Feature: domain Description: umuC Location: 13 4186-13 5449 bp Feature: gene Location: 135454-135879 bp Ori: KMB89303.1 Feature: domain Description: PRK10276 Location: 135457-135865 bp Feature: domain Description: PRK10276 Location: 13 5457-13 5865 bp Feature: gene Location: 136282-137769 bp Ori: KMB89304.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136687-137377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 6687-13 73 77 bp Feature: gene Location: 138003-138233 bp Feature: gene Location: 138754-139179 bp Ori: KMB89306.1 Feature: domain Description: Antirestrict Location: 138889-139177 bp Feature: domain Description: Antirestrict Location: 13 8889-13 9177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088604.1 Klebsiella pneumoniae strain CHS157 genomic scaffold aetgv-supercont1.1, whole genome shotgun sequence (2281863 bp)
Overview 1 RT 1: 882956-889439 bp Neighborhood of RT #1 [882956, 889441] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 882956-884014 bp Ori: KMB95889.1 Feature: domain Description: YccC Location: 882962-884000 bp Feature: domain Description: YccC Location: 882962-884 000 bp Feature: gene Location: 884113-884586 bp Ori: KMB95890.1 Feature: domain Description: PRK10016 Location: 884116-884575 bp Feature: domain Description: PRK10016 Location: 884 116-884 575 bp Feature: gene Location: 884668-886155 bp Ori: KMB95891.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885073-885763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885073-885763 bp Feature: gene Location: 886673-887836 bp Ori: KMB95892.1 Feature: domain Description: dacD Location: 886676-887831 bp Feature: domain Description: dacD Location: 886676-887831 bp Feature: gene Location: 888017-889441 bp Ori: KMB95893.1 Feature: domain Description: SbcB Location: 888023-889439 bp Feature: domain Description: SbcB Location: 888023-8894 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)