myRT

myRT report for GCA_001032115.1_Kleb_pneu_CHS158_V1

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Seq: KQ088625.1 Klebsiella pneumoniae strain CHS158 genomic scaffold aetAN-supercont1.7, whole genome shotgun sequence (73383 bp)
Overview 1 RT 1: 19278-24631 bp Neighborhood of RT #1 [19278, 24768] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 19278-20549 bp Feature: domain Description: umuC Location: 19281-20541 bp Feature: domain Description: umuC Location: 1 9281 -20541 bp Feature: gene Location: 20549-20980 bp Feature: domain Description: PRK10276 Location: 20600-20963 bp Feature: domain Description: PRK1 0276 Location: 20600-20963 bp Feature: gene Location: 21063-22550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21468-22158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 468-221 58 bp Feature: gene Location: 23123-24094 bp Feature: domain Description: StbA Location: 23126-24071 bp Feature: domain Description: StbA Location: 231 26-24071 bp Feature: gene Location: 24097-24768 bp Feature: domain Description: Plasmid_stab_B Location: 24112-24319 bp Feature: domain Description: Plasmid_stab_B Location: 241 1 2-2431 9 bp Feature: domain Description: Plasmid_stab_B Location: 24424-24631 bp Feature: domain Description: Plasmid_stab_B Location: 24424-24631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088619.1 Klebsiella pneumoniae strain CHS158 genomic scaffold aetAN-supercont1.1, whole genome shotgun sequence (3203499 bp)
Overview 1 RT 1: 304728-308135 bp 2 RT 2: 747535-753140 bp 3 RT 3: 1091136-1096554 bp 4 RT 4: 1274663-1280528 bp 5 RT 5: 2648575-2655058 bp Neighborhood of RT #1 [304728, 308236] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [747535, 753166] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1091136, 1096556] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1274663, 1280530] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2648575, 2655060] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 304728-305459 bp Feature: domain Description: Laminin_G_3 Location: 305049-305403 bp Feature: domain Description: Laminin_G_3 Location: 305049-305403 bp Feature: gene Location: 305456-305665 bp Feature: gene Location: 306115-307602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306520-307210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30652 0-3072 10 bp Feature: gene Location: 307680-307919 bp Feature: gene Location: 307919-308236 bp Feature: domain Description: PRK10276 Location: 307925-308039 bp Feature: domain Description: PRK102 76 Location: 30792 5-308039 bp Feature: domain Description: PRK10276 Location: 308066-308135 bp Feature: domain Description: PRK102 76 Location: 308066-308135 bp Feature: gene Location: 747535-748098 bp Feature: domain Description: YbjK Location: 747541-748078 bp Feature: domain Description: YbjK Location: 747541-748078 bp Feature: gene Location: 748221-749273 bp Feature: domain Description: int Location: 748224-749223 bp Feature: domain Description: int Location: 7482 2 4-7492 2 3 bp Feature: gene Location: 749689-751176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750094-750784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750094-750784 bp Feature: gene Location: 751275-752219 bp Feature: gene Location: 752231-753166 bp Feature: domain Description: Phage_CI_repr Location: 752315-752498 bp Feature: domain Description: Phage_CI_repr Location: 752 315-752 498 bp Feature: domain Description: Phage_CI_repr Location: 752627-752819 bp Feature: domain Description: Phage_CI_repr Location: 752 62 7-752 819 bp Feature: domain Description: Phage_CI_C Location: 752846-753140 bp Feature: domain Description: Phage_CI_C Location: 752 846-753140 bp Feature: gene Location: 1091136-1092275 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1091319-1092219 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1091319-1092 2 19 bp Feature: gene Location: 1092446-1092688 bp Feature: domain Description: DinI Location: 1092497-1092677 bp Feature: domain Description: DinI Location: 1092 497-1092 677 bp Feature: gene Location: 1093303-1094790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1093708-1094398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1093708-1094398 bp Feature: gene Location: 1094869-1095288 bp Feature: domain Description: PRK10276 Location: 1094872-1095283 bp Feature: domain Description: PRK102 76 Location: 1094872 -10952 83 bp Feature: gene Location: 1095291-1096556 bp Feature: domain Description: umuC Location: 1095294-1096554 bp Feature: domain Description: umuC Location: 10952 94-1096554 bp Feature: gene Location: 1274663-1275367 bp Feature: domain Description: Rve Location: 1274666-1275311 bp Feature: domain Description: Rve Location: 12 74666-12 75311 bp Feature: gene Location: 1275433-1275882 bp Feature: domain Description: PinE Location: 1275442-1275874 bp Feature: domain Description: PinE Location: 12 75442 -12 75874 bp Feature: gene Location: 1277277-1278764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277682-1278372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 77682 -12 78372 bp Feature: gene Location: 1278757-1279263 bp Feature: domain Description: PRK10276 Location: 1278847-1279258 bp Feature: domain Description: PRK102 76 Location: 12 78847-12 792 58 bp Feature: gene Location: 1279265-1280530 bp Feature: domain Description: umuC Location: 1279268-1280528 bp Feature: domain Description: umuC Location: 12 792 68-12 8052 8 bp Feature: gene Location: 2648575-2649633 bp Feature: domain Description: YccC Location: 2648581-2649619 bp Feature: domain Description: YccC Location: 2 648581-2 649619 bp Feature: gene Location: 2649732-2650205 bp Feature: domain Description: PRK10016 Location: 2649735-2650194 bp Feature: domain Description: PRK10016 Location: 2 649735-2 650194 bp Feature: gene Location: 2650287-2651774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2650692-2651382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 650692 -2 651382 bp Feature: gene Location: 2652292-2653455 bp Feature: domain Description: dacD Location: 2652295-2653450 bp Feature: domain Description: dacD Location: 2 652 2 95-2 653450 bp Feature: gene Location: 2653636-2655060 bp Feature: domain Description: SbcB Location: 2653642-2655058 bp Feature: domain Description: SbcB Location: 2 653642 -2 655058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088622.1 Klebsiella pneumoniae strain CHS158 genomic scaffold aetAN-supercont1.4, whole genome shotgun sequence (136814 bp)
Overview 1 RT 1: 113003-117997 bp Neighborhood of RT #1 [113003, 117999] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 113003-114274 bp Feature: domain Description: umuC Location: 113006-114269 bp Feature: domain Description: umuC Location: 113 006-114269 bp Feature: gene Location: 114274-114699 bp Feature: domain Description: PRK10276 Location: 114277-114685 bp Feature: domain Description: PRK10276 Location: 114277-114685 bp Feature: gene Location: 115102-116589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115507-116197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115507-116197 bp Feature: gene Location: 116823-117053 bp Feature: gene Location: 117574-117999 bp Feature: domain Description: Antirestrict Location: 117709-117997 bp Feature: domain Description: Antirestrict Location: 117709-117997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)