myRT

myRT report for GCA_001032145.1_Kleb_pneu_CHS160_V1

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Seq: KQ088645.1 Klebsiella pneumoniae strain CHS160 genomic scaffold aetAv-supercont1.2, whole genome shotgun sequence (1339900 bp)
Overview 1 RT 1: 785751-792234 bp Neighborhood of RT #1 [785751, 792236] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 785751-786809 bp Feature: domain Description: YccC Location: 785757-786795 bp Feature: domain Description: YccC Location: 785757-786795 bp Feature: gene Location: 786908-787381 bp Feature: domain Description: PRK10016 Location: 786911-787370 bp Feature: domain Description: PRK1 001 6 Location: 78691 1 -787370 bp Feature: gene Location: 787463-788947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787865-788555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787865-788555 bp Feature: gene Location: 789468-790631 bp Feature: domain Description: dacD Location: 789471-790626 bp Feature: domain Description: dacD Location: 789471 -790626 bp Feature: gene Location: 790812-792236 bp Feature: domain Description: SbcB Location: 790818-792234 bp Feature: domain Description: SbcB Location: 79081 8-792234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088650.1 Klebsiella pneumoniae strain CHS160 genomic scaffold aetAv-supercont1.7, whole genome shotgun sequence (139909 bp)
Overview 1 RT 1: 82325-87319 bp Neighborhood of RT #1 [82325, 87321] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82325-83596 bp Feature: domain Description: umuC Location: 82328-83591 bp Feature: domain Description: umuC Location: 82 32 8-83591 bp Feature: gene Location: 83596-84021 bp Feature: domain Description: PRK10276 Location: 83599-84007 bp Feature: domain Description: PRK102 76 Location: 83599-84007 bp Feature: gene Location: 84427-85911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84829-85519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8482 9-85519 bp Feature: gene Location: 86145-86375 bp Feature: gene Location: 86896-87321 bp Feature: domain Description: Antirestrict Location: 87031-87319 bp Feature: domain Description: Antirestrict Location: 87031-87319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088644.1 Klebsiella pneumoniae strain CHS160 genomic scaffold aetAv-supercont1.1, whole genome shotgun sequence (1682664 bp)
Overview 1 RT 1: 328068-331475 bp 2 RT 2: 770431-776036 bp 3 RT 3: 778981-784488 bp 4 RT 4: 1116891-1122309 bp Neighborhood of RT #1 [328068, 331576] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [770431, 776062] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [778981, 784493] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1116891, 1122311] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 328068-328799 bp Feature: domain Description: Laminin_G_3 Location: 328389-328743 bp Feature: domain Description: Laminin_G_3 Location: 3 283 89-3 28743 bp Feature: gene Location: 328796-329005 bp Feature: gene Location: 329458-330942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329860-330550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 29860-3 3 0550 bp Feature: gene Location: 331020-331259 bp Feature: gene Location: 331259-331576 bp Feature: domain Description: PRK10276 Location: 331265-331379 bp Feature: domain Description: PRK10276 Location: 3 3 1265-3 3 13 79 bp Feature: domain Description: PRK10276 Location: 331406-331475 bp Feature: domain Description: PRK10276 Location: 3 3 1406-3 3 1475 bp Feature: gene Location: 770431-770994 bp Feature: domain Description: YbjK Location: 770437-770974 bp Feature: domain Description: YbjK Location: 77043 7-770974 bp Feature: gene Location: 771117-772169 bp Feature: domain Description: int Location: 771120-772119 bp Feature: domain Description: int Location: 771120-772119 bp Feature: gene Location: 772588-774072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772990-773680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772990-773 680 bp Feature: gene Location: 774171-775115 bp Feature: gene Location: 775127-776062 bp Feature: domain Description: Phage_CI_repr Location: 775211-775394 bp Feature: domain Description: Phage_CI_repr Location: 775211-7753 94 bp Feature: domain Description: Phage_CI_repr Location: 775523-775715 bp Feature: domain Description: Phage_CI_repr Location: 775523 -775715 bp Feature: domain Description: Phage_CI_C Location: 775742-776036 bp Feature: domain Description: Phage_CI_C Location: 775742-77603 6 bp Feature: gene Location: 778981-779586 bp Feature: domain Description: dam Location: 778987-779509 bp Feature: domain Description: dam Location: 778987-779509 bp Feature: gene Location: 779583-781997 bp Feature: domain Description: Phage_GPA Location: 780147-781113 bp Feature: domain Description: Phage_GPA Location: 780147-781113 bp Feature: gene Location: 782476-783960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782878-783568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782878-783 568 bp Feature: gene Location: 784061-784249 bp Feature: gene Location: 784260-784493 bp Feature: domain Description: DinI Location: 784302-784488 bp Feature: domain Description: DinI Location: 7843 02-784488 bp Feature: gene Location: 1116891-1118030 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117074-1117974 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117074-1117974 bp Feature: gene Location: 1118201-1118443 bp Feature: domain Description: DinI Location: 1118252-1118432 bp Feature: domain Description: DinI Location: 1118252-111843 2 bp Feature: gene Location: 1119061-1120545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119463-1120153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119463 -1120153 bp Feature: gene Location: 1120624-1121043 bp Feature: domain Description: PRK10276 Location: 1120627-1121038 bp Feature: domain Description: PRK10276 Location: 1120627-112103 8 bp Feature: gene Location: 1121046-1122311 bp Feature: domain Description: umuC Location: 1121049-1122309 bp Feature: domain Description: umuC Location: 1121049-11223 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609)