myRT

myRT report for GCA_001032225.1_Kleb_pneu_CHS164_V1

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Seq: KQ088691.1 Klebsiella pneumoniae strain CHS164 genomic scaffold aetyy-supercont1.1, whole genome shotgun sequence (3543958 bp)
Overview 1 RT 1: 890807-897290 bp Neighborhood of RT #1 [890807, 897292] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 890807-891865 bp Feature: domain Description: YccC Location: 890813-891851 bp Feature: domain Description: YccC Location: 89081 3-891 851 bp Feature: gene Location: 891964-892437 bp Feature: domain Description: PRK10016 Location: 891967-892426 bp Feature: domain Description: PRK1 001 6 Location: 891 967-892426 bp Feature: gene Location: 892519-894006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892924-893614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892924-89361 4 bp Feature: gene Location: 894524-895687 bp Feature: domain Description: dacD Location: 894527-895682 bp Feature: domain Description: dacD Location: 894527-895682 bp Feature: gene Location: 895868-897292 bp Feature: domain Description: SbcB Location: 895874-897290 bp Feature: domain Description: SbcB Location: 895874-897290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088692.1 Klebsiella pneumoniae strain CHS164 genomic scaffold aetyy-supercont1.2, whole genome shotgun sequence (2046039 bp)
Overview 1 RT 1: 584977-588384 bp 2 RT 2: 1027383-1032988 bp 3 RT 3: 1370535-1375953 bp 4 RT 4: 1558992-1564857 bp Neighborhood of RT #1 [584977, 588485] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027383, 1033014] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370535, 1375955] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1558992, 1564859] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 584977-585708 bp Feature: domain Description: Laminin_G_3 Location: 585298-585652 bp Feature: domain Description: Laminin_G_3 Location: 5852 98-585652 bp Feature: gene Location: 585705-585914 bp Feature: gene Location: 586364-587851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586769-587459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586769-587459 bp Feature: gene Location: 587929-588168 bp Feature: gene Location: 588168-588485 bp Feature: domain Description: PRK10276 Location: 588174-588288 bp Feature: domain Description: PRK102 76 Location: 588174-5882 88 bp Feature: domain Description: PRK10276 Location: 588315-588384 bp Feature: domain Description: PRK102 76 Location: 588315-588384 bp Feature: gene Location: 1027383-1027946 bp Feature: domain Description: YbjK Location: 1027389-1027926 bp Feature: domain Description: YbjK Location: 102 7389-102 792 6 bp Feature: gene Location: 1028069-1029121 bp Feature: domain Description: int Location: 1028072-1029071 bp Feature: domain Description: int Location: 102 8072 -102 9071 bp Feature: gene Location: 1029537-1031024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029942-1030632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 9942 -1030632 bp Feature: gene Location: 1031123-1032067 bp Feature: gene Location: 1032079-1033014 bp Feature: domain Description: Phage_CI_repr Location: 1032163-1032346 bp Feature: domain Description: Phage_CI_repr Location: 1032 163-1032 346 bp Feature: domain Description: Phage_CI_repr Location: 1032475-1032667 bp Feature: domain Description: Phage_CI_repr Location: 1032 475-1032 667 bp Feature: domain Description: Phage_CI_C Location: 1032694-1032988 bp Feature: domain Description: Phage_CI_C Location: 1032 694-1032 988 bp Feature: gene Location: 1370535-1371674 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370718-1371618 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370718-1371618 bp Feature: gene Location: 1371845-1372087 bp Feature: domain Description: DinI Location: 1371896-1372076 bp Feature: domain Description: DinI Location: 1371896-1372 076 bp Feature: gene Location: 1372702-1374189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373107-1373797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373107-1373797 bp Feature: gene Location: 1374268-1374687 bp Feature: domain Description: PRK10276 Location: 1374271-1374682 bp Feature: domain Description: PRK102 76 Location: 13742 71-1374682 bp Feature: gene Location: 1374690-1375955 bp Feature: domain Description: umuC Location: 1374693-1375953 bp Feature: domain Description: umuC Location: 1374693-1375953 bp Feature: gene Location: 1558992-1559696 bp Feature: domain Description: Rve Location: 1558995-1559640 bp Feature: domain Description: Rve Location: 1558995-1559640 bp Feature: gene Location: 1559762-1560211 bp Feature: domain Description: PinE Location: 1559771-1560203 bp Feature: domain Description: PinE Location: 1559771-15602 03 bp Feature: gene Location: 1561606-1563093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562011-1562701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562 011-1562 701 bp Feature: gene Location: 1563086-1563592 bp Feature: domain Description: PRK10276 Location: 1563176-1563587 bp Feature: domain Description: PRK102 76 Location: 1563176-1563587 bp Feature: gene Location: 1563594-1564859 bp Feature: domain Description: umuC Location: 1563597-1564857 bp Feature: domain Description: umuC Location: 1563597-1564857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088693.1 Klebsiella pneumoniae strain CHS164 genomic scaffold aetyy-supercont1.3, whole genome shotgun sequence (237897 bp)
Overview 1 RT 1: 89902-94896 bp 2 RT 2: 195105-200458 bp Neighborhood of RT #1 [89902, 94898] umuC PRK10276 RVT-GII Antirestrict Neighborhood of RT #2 [195105, 200595] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 89902-91173 bp Feature: domain Description: umuC Location: 89905-91168 bp Feature: domain Description: umuC Location: 89905-91168 bp Feature: gene Location: 91173-91598 bp Feature: domain Description: PRK10276 Location: 91176-91584 bp Feature: domain Description: PRK10276 Location: 91176-91584 bp Feature: gene Location: 92001-93488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92406-93096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92406-93 096 bp Feature: gene Location: 93722-93952 bp Feature: gene Location: 94473-94898 bp Feature: domain Description: Antirestrict Location: 94608-94896 bp Feature: domain Description: Antirestrict Location: 94608-94896 bp Feature: gene Location: 195105-196376 bp Feature: domain Description: umuC Location: 195108-196368 bp Feature: domain Description: umuC Location: 195108-1963 68 bp Feature: gene Location: 196376-196807 bp Feature: domain Description: PRK10276 Location: 196427-196790 bp Feature: domain Description: PRK10276 Location: 196427-196790 bp Feature: gene Location: 196890-198377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197295-197985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197295-197985 bp Feature: gene Location: 198950-199921 bp Feature: domain Description: StbA Location: 198953-199898 bp Feature: domain Description: StbA Location: 198953 -199898 bp Feature: gene Location: 199924-200595 bp Feature: domain Description: Plasmid_stab_B Location: 199939-200146 bp Feature: domain Description: Plasmid_stab_B Location: 19993 9-200146 bp Feature: domain Description: Plasmid_stab_B Location: 200251-200458 bp Feature: domain Description: Plasmid_stab_B Location: 200251-200458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230), StbA (pfam06406), Plasmid_stab_B (pfam10784)