myRT

myRT report for GCA_001032265.1_Kleb_pneu_CHS165_V1

Download annotations/find similar RTs

Seq: KQ088697.1 Klebsiella pneumoniae strain CHS165 genomic scaffold aetyF-supercont1.1, whole genome shotgun sequence (3948763 bp)
Overview 1 RT 1: 1291398-1297881 bp 2 RT 2: 1719481-1725033 bp Neighborhood of RT #1 [1291398, 1297883] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1719481, 1725356] PHA02515 RVT-GII COG3617 Feature: gene Location: 1291398-1292456 bp Feature: domain Description: YccC Location: 1291404-1292442 bp Feature: domain Description: YccC Location: 1 291 404-1 292442 bp Feature: gene Location: 1292555-1293028 bp Feature: domain Description: PRK10016 Location: 1292558-1293017 bp Feature: domain Description: PRK1 001 6 Location: 1 292558-1 29301 7 bp Feature: gene Location: 1293110-1294594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1293512-1294202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29351 2-1 294202 bp Feature: gene Location: 1295115-1296278 bp Feature: domain Description: dacD Location: 1295118-1296273 bp Feature: domain Description: dacD Location: 1 2951 1 8-1 296273 bp Feature: gene Location: 1296459-1297883 bp Feature: domain Description: SbcB Location: 1296465-1297881 bp Feature: domain Description: SbcB Location: 1 296465-1 297881 bp Feature: gene Location: 1719481-1719633 bp Feature: gene Location: 1719642-1722008 bp Feature: domain Description: PHA02515 Location: 1719654-1719996 bp Feature: domain Description: PHA0251 5 Location: 1 71 9654-1 71 9996 bp Feature: gene Location: 1722549-1724033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1722951-1723641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 722951 -1 723641 bp Feature: gene Location: 1724111-1724371 bp Feature: gene Location: 1724685-1725356 bp Feature: domain Description: COG3617 Location: 1724691-1725033 bp Feature: domain Description: COG361 7 Location: 1 724691 -1 725033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional), COG3617 (Prophage antirepressor )

Seq: KQ088698.1 Klebsiella pneumoniae strain CHS165 genomic scaffold aetyF-supercont1.2, whole genome shotgun sequence (1543430 bp)
Overview 1 RT 1: 584370-587777 bp 2 RT 2: 1028212-1032381 bp 3 RT 3: 1363822-1369240 bp Neighborhood of RT #1 [584370, 587878] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028212, 1032386] YbjK int RVT-GII DinI Neighborhood of RT #3 [1363822, 1369242] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 584370-585101 bp Feature: domain Description: Laminin_G_3 Location: 584688-585045 bp Feature: domain Description: Laminin_G_3 Location: 584688-585045 bp Feature: gene Location: 585098-585307 bp Feature: gene Location: 585760-587244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586162-586852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586162 -586852 bp Feature: gene Location: 587322-587561 bp Feature: gene Location: 587561-587878 bp Feature: domain Description: PRK10276 Location: 587567-587681 bp Feature: domain Description: PRK102 76 Location: 587567-587681 bp Feature: domain Description: PRK10276 Location: 587708-587777 bp Feature: domain Description: PRK102 76 Location: 587708-587777 bp Feature: gene Location: 1028212-1028775 bp Feature: domain Description: YbjK Location: 1028218-1028755 bp Feature: domain Description: YbjK Location: 102 82 18-102 8755 bp Feature: gene Location: 1028898-1029950 bp Feature: domain Description: int Location: 1028901-1029900 bp Feature: domain Description: int Location: 102 8901-102 9900 bp Feature: gene Location: 1030369-1031853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030771-1031461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030771-1031461 bp Feature: gene Location: 1031954-1032142 bp Feature: gene Location: 1032153-1032386 bp Feature: domain Description: DinI Location: 1032195-1032381 bp Feature: domain Description: DinI Location: 1032 195-1032 381 bp Feature: gene Location: 1363822-1364961 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1364005-1364905 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1364005-1364905 bp Feature: gene Location: 1365132-1365374 bp Feature: domain Description: DinI Location: 1365183-1365363 bp Feature: domain Description: DinI Location: 1365183-1365363 bp Feature: gene Location: 1365992-1367476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366394-1367084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366394-1367084 bp Feature: gene Location: 1367555-1367974 bp Feature: domain Description: PRK10276 Location: 1367558-1367969 bp Feature: domain Description: PRK102 76 Location: 1367558-1367969 bp Feature: gene Location: 1367977-1369242 bp Feature: domain Description: umuC Location: 1367980-1369240 bp Feature: domain Description: umuC Location: 1367980-13692 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609)