myRT

myRT report for GCA_001032275.1_Kleb_pneu_CHS166_V1

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Seq: KQ088708.1 Klebsiella pneumoniae strain CHS166 genomic scaffold aetyL-supercont1.6, whole genome shotgun sequence (215258 bp)
Overview 1 RT 1: 21186-25980 bp Neighborhood of RT #1 [21186, 25982] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 21186-22235 bp Feature: domain Description: umuC Location: 21189-22185 bp Feature: domain Description: umuC Location: 21 1 89-221 85 bp Feature: gene Location: 22235-22660 bp Feature: domain Description: PRK10276 Location: 22238-22646 bp Feature: domain Description: PRK1 0276 Location: 22238-22646 bp Feature: gene Location: 23065-24573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23467-24181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23467-241 81 bp Feature: gene Location: 24807-25037 bp Feature: gene Location: 25557-25982 bp Feature: domain Description: Antirestrict Location: 25692-25980 bp Feature: domain Description: Antirestrict Location: 25692-25980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088703.1 Klebsiella pneumoniae strain CHS166 genomic scaffold aetyL-supercont1.1, whole genome shotgun sequence (3228857 bp)
Overview 1 RT 1: 332087-335494 bp 2 RT 2: 774426-780031 bp 3 RT 3: 1117518-1122936 bp 4 RT 4: 1301045-1306910 bp 5 RT 5: 2674237-2680720 bp Neighborhood of RT #1 [332087, 335595] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [774426, 780057] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1117518, 1122938] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1301045, 1306912] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2674237, 2680722] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 332087-332818 bp Feature: domain Description: Laminin_G_3 Location: 332408-332762 bp Feature: domain Description: Laminin_G_3 Location: 332 408-332 762 bp Feature: gene Location: 332815-333024 bp Feature: gene Location: 333477-334961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333879-334569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333879-334569 bp Feature: gene Location: 335039-335278 bp Feature: gene Location: 335278-335595 bp Feature: domain Description: PRK10276 Location: 335284-335398 bp Feature: domain Description: PRK102 76 Location: 3352 84-335398 bp Feature: domain Description: PRK10276 Location: 335425-335494 bp Feature: domain Description: PRK102 76 Location: 33542 5-335494 bp Feature: gene Location: 774426-774989 bp Feature: domain Description: YbjK Location: 774432-774969 bp Feature: domain Description: YbjK Location: 774432 -774969 bp Feature: gene Location: 775112-776164 bp Feature: domain Description: int Location: 775115-776114 bp Feature: domain Description: int Location: 775115-776114 bp Feature: gene Location: 776583-778067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776985-777675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776985-777675 bp Feature: gene Location: 778166-779110 bp Feature: gene Location: 779122-780057 bp Feature: domain Description: Phage_CI_repr Location: 779206-779389 bp Feature: domain Description: Phage_CI_repr Location: 7792 06-779389 bp Feature: domain Description: Phage_CI_repr Location: 779518-779710 bp Feature: domain Description: Phage_CI_repr Location: 779518-779710 bp Feature: domain Description: Phage_CI_C Location: 779737-780031 bp Feature: domain Description: Phage_CI_C Location: 779737-780031 bp Feature: gene Location: 1117518-1118657 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117701-1118601 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117701-1118601 bp Feature: gene Location: 1118828-1119070 bp Feature: domain Description: DinI Location: 1118879-1119059 bp Feature: domain Description: DinI Location: 1118879-1119059 bp Feature: gene Location: 1119688-1121172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120090-1120780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 0090-112 0780 bp Feature: gene Location: 1121251-1121670 bp Feature: domain Description: PRK10276 Location: 1121254-1121665 bp Feature: domain Description: PRK102 76 Location: 112 12 54-112 1665 bp Feature: gene Location: 1121673-1122938 bp Feature: domain Description: umuC Location: 1121676-1122936 bp Feature: domain Description: umuC Location: 112 1676-112 2 936 bp Feature: gene Location: 1301045-1301749 bp Feature: domain Description: Rve Location: 1301048-1301693 bp Feature: domain Description: Rve Location: 1301048-1301693 bp Feature: gene Location: 1301815-1302264 bp Feature: domain Description: PinE Location: 1301824-1302256 bp Feature: domain Description: PinE Location: 130182 4-1302 2 56 bp Feature: gene Location: 1303662-1305146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304064-1304754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304064-1304754 bp Feature: gene Location: 1305139-1305645 bp Feature: domain Description: PRK10276 Location: 1305229-1305640 bp Feature: domain Description: PRK102 76 Location: 13052 2 9-1305640 bp Feature: gene Location: 1305647-1306912 bp Feature: domain Description: umuC Location: 1305650-1306910 bp Feature: domain Description: umuC Location: 1305650-1306910 bp Feature: gene Location: 2674237-2675295 bp Feature: domain Description: YccC Location: 2674243-2675281 bp Feature: domain Description: YccC Location: 2 6742 43-2 6752 81 bp Feature: gene Location: 2675394-2675867 bp Feature: domain Description: PRK10016 Location: 2675397-2675856 bp Feature: domain Description: PRK10016 Location: 2 675397-2 675856 bp Feature: gene Location: 2675949-2677433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2676351-2677041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 676351-2 677041 bp Feature: gene Location: 2677954-2679117 bp Feature: domain Description: dacD Location: 2677957-2679112 bp Feature: domain Description: dacD Location: 2 677957-2 679112 bp Feature: gene Location: 2679298-2680722 bp Feature: domain Description: SbcB Location: 2679304-2680720 bp Feature: domain Description: SbcB Location: 2 679304-2 68072 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)