myRT

myRT report for GCA_001032285.1_Kleb_pneu_CHS167_V1

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Seq: KQ088717.1 Klebsiella pneumoniae strain CHS167 genomic scaffold aetzS-supercont1.3, whole genome shotgun sequence (175000 bp)
Overview 1 RT 1: 117320-122314 bp Neighborhood of RT #1 [117320, 122316] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117320-118591 bp Feature: domain Description: umuC Location: 117323-118586 bp Feature: domain Description: umuC Location: 1 1 7323-1 1 8586 bp Feature: gene Location: 118591-119016 bp Feature: domain Description: PRK10276 Location: 118594-119002 bp Feature: domain Description: PRK1 0276 Location: 1 1 8594-1 1 9002 bp Feature: gene Location: 119419-120906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119824-120514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9824-1 2051 4 bp Feature: gene Location: 121140-121370 bp Feature: gene Location: 121891-122316 bp Feature: domain Description: Antirestrict Location: 122026-122314 bp Feature: domain Description: Antirestrict Location: 1 22026-1 2231 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088715.1 Klebsiella pneumoniae strain CHS167 genomic scaffold aetzS-supercont1.1, whole genome shotgun sequence (3528725 bp)
Overview 1 RT 1: 884743-891226 bp Neighborhood of RT #1 [884743, 891228] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884743-885801 bp Feature: domain Description: YccC Location: 884749-885787 bp Feature: domain Description: YccC Location: 884749-885787 bp Feature: gene Location: 885900-886373 bp Feature: domain Description: PRK10016 Location: 885903-886362 bp Feature: domain Description: PRK10016 Location: 885903-886362 bp Feature: gene Location: 886455-887942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886860-887550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886860-887550 bp Feature: gene Location: 888460-889623 bp Feature: domain Description: dacD Location: 888463-889618 bp Feature: domain Description: dacD Location: 888463-889618 bp Feature: gene Location: 889804-891228 bp Feature: domain Description: SbcB Location: 889810-891226 bp Feature: domain Description: SbcB Location: 889810-8912 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088716.1 Klebsiella pneumoniae strain CHS167 genomic scaffold aetzS-supercont1.2, whole genome shotgun sequence (2025050 bp)
Overview 1 RT 1: 583317-586724 bp 2 RT 2: 1025959-1031564 bp 3 RT 3: 1369244-1374662 bp 4 RT 4: 1552741-1558606 bp Neighborhood of RT #1 [583317, 586825] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025959, 1031590] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369244, 1374664] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1552741, 1558608] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583317-584048 bp Feature: domain Description: Laminin_G_3 Location: 583638-583992 bp Feature: domain Description: Laminin_G_3 Location: 583 63 8-583 992 bp Feature: gene Location: 584045-584254 bp Feature: gene Location: 584704-586191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585109-585799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585109-585799 bp Feature: gene Location: 586269-586508 bp Feature: gene Location: 586508-586825 bp Feature: domain Description: PRK10276 Location: 586514-586628 bp Feature: domain Description: PRK10276 Location: 586514-586628 bp Feature: domain Description: PRK10276 Location: 586655-586724 bp Feature: domain Description: PRK10276 Location: 586655-586724 bp Feature: gene Location: 1025959-1026522 bp Feature: domain Description: YbjK Location: 1025965-1026502 bp Feature: domain Description: YbjK Location: 1025965-1026502 bp Feature: gene Location: 1026645-1027697 bp Feature: domain Description: int Location: 1026648-1027647 bp Feature: domain Description: int Location: 1026648-1027647 bp Feature: gene Location: 1028113-1029600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028518-1029208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028518-1029208 bp Feature: gene Location: 1029699-1030643 bp Feature: gene Location: 1030655-1031590 bp Feature: domain Description: Phage_CI_repr Location: 1030739-1030922 bp Feature: domain Description: Phage_CI_repr Location: 103 073 9-103 0922 bp Feature: domain Description: Phage_CI_repr Location: 1031051-1031243 bp Feature: domain Description: Phage_CI_repr Location: 103 1051-103 1243 bp Feature: domain Description: Phage_CI_C Location: 1031270-1031564 bp Feature: domain Description: Phage_CI_C Location: 103 1270-103 1564 bp Feature: gene Location: 1369244-1370383 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369427-1370327 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 69427-13 703 27 bp Feature: gene Location: 1370554-1370796 bp Feature: domain Description: DinI Location: 1370605-1370785 bp Feature: domain Description: DinI Location: 13 70605-13 70785 bp Feature: gene Location: 1371411-1372898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371816-1372506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 71816-13 72506 bp Feature: gene Location: 1372977-1373396 bp Feature: domain Description: PRK10276 Location: 1372980-1373391 bp Feature: domain Description: PRK10276 Location: 13 72980-13 73 3 91 bp Feature: gene Location: 1373399-1374664 bp Feature: domain Description: umuC Location: 1373402-1374662 bp Feature: domain Description: umuC Location: 13 73 402-13 74662 bp Feature: gene Location: 1552741-1553445 bp Feature: domain Description: Rve Location: 1552744-1553389 bp Feature: domain Description: Rve Location: 1552744-1553 3 89 bp Feature: gene Location: 1553511-1553960 bp Feature: domain Description: PinE Location: 1553520-1553952 bp Feature: domain Description: PinE Location: 1553 520-1553 952 bp Feature: gene Location: 1555355-1556842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555760-1556450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555760-1556450 bp Feature: gene Location: 1556835-1557341 bp Feature: domain Description: PRK10276 Location: 1556925-1557336 bp Feature: domain Description: PRK10276 Location: 1556925-15573 3 6 bp Feature: gene Location: 1557343-1558608 bp Feature: domain Description: umuC Location: 1557346-1558606 bp Feature: domain Description: umuC Location: 15573 46-1558606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)