myRT

myRT report for GCA_001032305.1_Kleb_pneu_CHS168_V1

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Seq: KQ088723.1 Klebsiella pneumoniae strain CHS168 genomic scaffold aetAO-supercont1.1, whole genome shotgun sequence (3539673 bp)
Overview 1 RT 1: 885306-891789 bp Neighborhood of RT #1 [885306, 891791] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 885306-886364 bp Feature: domain Description: YccC Location: 885312-886350 bp Feature: domain Description: YccC Location: 88531 2-886350 bp Feature: gene Location: 886463-886936 bp Feature: domain Description: PRK10016 Location: 886466-886925 bp Feature: domain Description: PRK1 001 6 Location: 886466-886925 bp Feature: gene Location: 887018-888502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887420-888110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887420-8881 1 0 bp Feature: gene Location: 889023-890186 bp Feature: domain Description: dacD Location: 889026-890181 bp Feature: domain Description: dacD Location: 889026-8901 81 bp Feature: gene Location: 890367-891791 bp Feature: domain Description: SbcB Location: 890373-891789 bp Feature: domain Description: SbcB Location: 890373-891 789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088724.1 Klebsiella pneumoniae strain CHS168 genomic scaffold aetAO-supercont1.2, whole genome shotgun sequence (2015602 bp)
Overview 1 RT 1: 583076-586483 bp 2 RT 2: 1026080-1031685 bp 3 RT 3: 1369185-1374603 bp 4 RT 4: 1553449-1558771 bp Neighborhood of RT #1 [583076, 586584] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026080, 1031711] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369185, 1374605] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553449, 1558773] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583076-583807 bp Feature: domain Description: Laminin_G_3 Location: 583397-583751 bp Feature: domain Description: Laminin_G_3 Location: 583397-583751 bp Feature: gene Location: 583804-584013 bp Feature: gene Location: 584466-585950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584868-585558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584868-585558 bp Feature: gene Location: 586028-586267 bp Feature: gene Location: 586267-586584 bp Feature: domain Description: PRK10276 Location: 586273-586387 bp Feature: domain Description: PRK102 76 Location: 5862 73-586387 bp Feature: domain Description: PRK10276 Location: 586414-586483 bp Feature: domain Description: PRK102 76 Location: 586414-586483 bp Feature: gene Location: 1026080-1026643 bp Feature: domain Description: YbjK Location: 1026086-1026623 bp Feature: domain Description: YbjK Location: 102 6086-102 662 3 bp Feature: gene Location: 1026766-1027818 bp Feature: domain Description: int Location: 1026769-1027768 bp Feature: domain Description: int Location: 102 6769-102 7768 bp Feature: gene Location: 1028237-1029721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028639-1029329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8639-102 932 9 bp Feature: gene Location: 1029820-1030764 bp Feature: gene Location: 1030776-1031711 bp Feature: domain Description: Phage_CI_repr Location: 1030860-1031043 bp Feature: domain Description: Phage_CI_repr Location: 1030860-1031043 bp Feature: domain Description: Phage_CI_repr Location: 1031172-1031364 bp Feature: domain Description: Phage_CI_repr Location: 1031172 -1031364 bp Feature: domain Description: Phage_CI_C Location: 1031391-1031685 bp Feature: domain Description: Phage_CI_C Location: 1031391-1031685 bp Feature: gene Location: 1369185-1370324 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369368-1370268 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369368-13702 68 bp Feature: gene Location: 1370495-1370737 bp Feature: domain Description: DinI Location: 1370546-1370726 bp Feature: domain Description: DinI Location: 1370546-137072 6 bp Feature: gene Location: 1371355-1372839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371757-1372447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371757-1372 447 bp Feature: gene Location: 1372918-1373337 bp Feature: domain Description: PRK10276 Location: 1372921-1373332 bp Feature: domain Description: PRK102 76 Location: 1372 92 1-1373332 bp Feature: gene Location: 1373340-1374605 bp Feature: domain Description: umuC Location: 1373343-1374603 bp Feature: domain Description: umuC Location: 1373343-1374603 bp Feature: gene Location: 1553449-1553610 bp Feature: gene Location: 1553676-1554125 bp Feature: domain Description: PinE Location: 1553685-1554117 bp Feature: domain Description: PinE Location: 1553685-1554117 bp Feature: gene Location: 1555523-1557007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555925-1556615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155592 5-1556615 bp Feature: gene Location: 1557000-1557506 bp Feature: domain Description: PRK10276 Location: 1557090-1557501 bp Feature: domain Description: PRK102 76 Location: 1557090-1557501 bp Feature: gene Location: 1557508-1558773 bp Feature: domain Description: umuC Location: 1557511-1558771 bp Feature: domain Description: umuC Location: 1557511-1558771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ088725.1 Klebsiella pneumoniae strain CHS168 genomic scaffold aetAO-supercont1.3, whole genome shotgun sequence (150367 bp)
Overview 1 RT 1: 92862-97856 bp Neighborhood of RT #1 [92862, 97858] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 92862-94133 bp Feature: domain Description: umuC Location: 92865-94128 bp Feature: domain Description: umuC Location: 92865-94128 bp Feature: gene Location: 94133-94558 bp Feature: domain Description: PRK10276 Location: 94136-94544 bp Feature: domain Description: PRK10276 Location: 9413 6-94544 bp Feature: gene Location: 94964-96448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95366-96056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953 66-96056 bp Feature: gene Location: 96682-96912 bp Feature: gene Location: 97433-97858 bp Feature: domain Description: Antirestrict Location: 97568-97856 bp Feature: domain Description: Antirestrict Location: 97568-97856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)