myRT

myRT report for GCA_001032345.1_Kleb_pneu_CHS169_V1

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Seq: KQ088731.1 Klebsiella pneumoniae strain CHS169 genomic scaffold aetgc-supercont1.1, whole genome shotgun sequence (5531590 bp)
Overview 1 RT 1: 1328674-1334092 bp 2 RT 2: 2890261-2896744 bp Neighborhood of RT #1 [1328674, 1334094] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [2890261, 2896746] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1328674-1329813 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1328857-1329757 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 328857-1 329757 bp Feature: gene Location: 1329984-1330226 bp Feature: domain Description: DinI Location: 1330035-1330215 bp Feature: domain Description: DinI Location: 1 330035-1 33021 5 bp Feature: gene Location: 1330841-1332328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331246-1331936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 331 246-1 331 936 bp Feature: gene Location: 1332407-1332826 bp Feature: domain Description: PRK10276 Location: 1332410-1332821 bp Feature: domain Description: PRK1 0276 Location: 1 33241 0-1 332821 bp Feature: gene Location: 1332829-1334094 bp Feature: domain Description: umuC Location: 1332832-1334092 bp Feature: domain Description: umuC Location: 1 332832-1 334092 bp Feature: gene Location: 2890261-2891319 bp Feature: domain Description: YccC Location: 2890267-2891305 bp Feature: domain Description: YccC Location: 2890267-2891 305 bp Feature: gene Location: 2891418-2891891 bp Feature: domain Description: PRK10016 Location: 2891421-2891880 bp Feature: domain Description: PRK1 001 6 Location: 2891 421 -2891 880 bp Feature: gene Location: 2891973-2893460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2892378-2893068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2892378-2893068 bp Feature: gene Location: 2893978-2895141 bp Feature: domain Description: dacD Location: 2893981-2895136 bp Feature: domain Description: dacD Location: 2893981 -28951 36 bp Feature: gene Location: 2895322-2896746 bp Feature: domain Description: SbcB Location: 2895328-2896744 bp Feature: domain Description: SbcB Location: 2895328-2896744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088734.1 Klebsiella pneumoniae strain CHS169 genomic scaffold aetgc-supercont1.4, whole genome shotgun sequence (39450 bp)
Overview 1 RT 1: 23121-28474 bp Neighborhood of RT #1 [23121, 28611] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 23121-24392 bp Feature: domain Description: umuC Location: 23124-24384 bp Feature: domain Description: umuC Location: 2 312 4-2 4384 bp Feature: gene Location: 24392-24823 bp Feature: domain Description: PRK10276 Location: 24443-24806 bp Feature: domain Description: PRK102 76 Location: 2 4443-2 4806 bp Feature: gene Location: 24906-26393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25311-26001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5311-2 6001 bp Feature: gene Location: 26966-27937 bp Feature: domain Description: StbA Location: 26969-27914 bp Feature: domain Description: StbA Location: 2 6969-2 7914 bp Feature: gene Location: 27940-28611 bp Feature: domain Description: Plasmid_stab_B Location: 27955-28162 bp Feature: domain Description: Plasmid_stab_B Location: 2 7955-2 8162 bp Feature: domain Description: Plasmid_stab_B Location: 28267-28474 bp Feature: domain Description: Plasmid_stab_B Location: 2 82 67-2 8474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088732.1 Klebsiella pneumoniae strain CHS169 genomic scaffold aetgc-supercont1.2, whole genome shotgun sequence (165996 bp)
Overview 1 RT 1: 82322-87316 bp Neighborhood of RT #1 [82322, 87318] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82322-83593 bp Feature: domain Description: umuC Location: 82325-83588 bp Feature: domain Description: umuC Location: 823 25-83 588 bp Feature: gene Location: 83593-84018 bp Feature: domain Description: PRK10276 Location: 83596-84004 bp Feature: domain Description: PRK10276 Location: 83 596-84004 bp Feature: gene Location: 84421-85908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84826-85516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84826-85516 bp Feature: gene Location: 86142-86372 bp Feature: gene Location: 86893-87318 bp Feature: domain Description: Antirestrict Location: 87028-87316 bp Feature: domain Description: Antirestrict Location: 87028-873 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)