myRT

myRT report for GCA_001032355.1_Kleb_pneu_CHS170_V1

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Seq: KQ088751.1 Klebsiella pneumoniae strain CHS170 genomic scaffold aetAd-supercont1.1, whole genome shotgun sequence (5449189 bp)
Overview 1 RT 1: 584334-587741 bp 2 RT 2: 1026865-1032470 bp 3 RT 3: 1370336-1375754 bp 4 RT 4: 1555721-1561586 bp 5 RT 5: 2929533-2936016 bp Neighborhood of RT #1 [584334, 587842] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026865, 1032496] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370336, 1375756] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555721, 1561588] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2929533, 2936018] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 584334-585065 bp Feature: domain Description: Laminin_G_3 Location: 584655-585009 bp Feature: domain Description: Laminin_G_3 Location: 584655-585009 bp Feature: gene Location: 585062-585271 bp Feature: gene Location: 585721-587208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586126-586816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5861 26-58681 6 bp Feature: gene Location: 587286-587525 bp Feature: gene Location: 587525-587842 bp Feature: domain Description: PRK10276 Location: 587531-587645 bp Feature: domain Description: PRK1 0276 Location: 587531 -587645 bp Feature: domain Description: PRK10276 Location: 587672-587741 bp Feature: domain Description: PRK1 0276 Location: 587672-587741 bp Feature: gene Location: 1026865-1027428 bp Feature: domain Description: YbjK Location: 1026871-1027408 bp Feature: domain Description: YbjK Location: 1 026871 -1 027408 bp Feature: gene Location: 1027551-1028603 bp Feature: domain Description: int Location: 1027554-1028553 bp Feature: domain Description: int Location: 1 027554-1 028553 bp Feature: gene Location: 1029019-1030506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029424-1030114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029424-1 0301 1 4 bp Feature: gene Location: 1030605-1031549 bp Feature: gene Location: 1031561-1032496 bp Feature: domain Description: Phage_CI_repr Location: 1031645-1031828 bp Feature: domain Description: Phage_CI_repr Location: 1 031 645-1 031 828 bp Feature: domain Description: Phage_CI_repr Location: 1031957-1032149 bp Feature: domain Description: Phage_CI_repr Location: 1 031 957-1 0321 49 bp Feature: domain Description: Phage_CI_C Location: 1032176-1032470 bp Feature: domain Description: Phage_CI_C Location: 1 0321 76-1 032470 bp Feature: gene Location: 1370336-1371475 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370519-1371419 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 37051 9-1 371 41 9 bp Feature: gene Location: 1371646-1371888 bp Feature: domain Description: DinI Location: 1371697-1371877 bp Feature: domain Description: DinI Location: 1 371 697-1 371 877 bp Feature: gene Location: 1372503-1373990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372908-1373598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372908-1 373598 bp Feature: gene Location: 1374069-1374488 bp Feature: domain Description: PRK10276 Location: 1374072-1374483 bp Feature: domain Description: PRK1 0276 Location: 1 374072-1 374483 bp Feature: gene Location: 1374491-1375756 bp Feature: domain Description: umuC Location: 1374494-1375754 bp Feature: domain Description: umuC Location: 1 374494-1 375754 bp Feature: gene Location: 1555721-1556425 bp Feature: domain Description: Rve Location: 1555724-1556369 bp Feature: domain Description: Rve Location: 1 555724-1 556369 bp Feature: gene Location: 1556491-1556940 bp Feature: domain Description: PinE Location: 1556500-1556932 bp Feature: domain Description: PinE Location: 1 556500-1 556932 bp Feature: gene Location: 1558335-1559822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558740-1559430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 558740-1 559430 bp Feature: gene Location: 1559815-1560321 bp Feature: domain Description: PRK10276 Location: 1559905-1560316 bp Feature: domain Description: PRK1 0276 Location: 1 559905-1 56031 6 bp Feature: gene Location: 1560323-1561588 bp Feature: domain Description: umuC Location: 1560326-1561586 bp Feature: domain Description: umuC Location: 1 560326-1 561 586 bp Feature: gene Location: 2929533-2930591 bp Feature: domain Description: YccC Location: 2929539-2930577 bp Feature: domain Description: YccC Location: 2929539-2930577 bp Feature: gene Location: 2930690-2931163 bp Feature: domain Description: PRK10016 Location: 2930693-2931152 bp Feature: domain Description: PRK1 001 6 Location: 2930693-2931 1 52 bp Feature: gene Location: 2931245-2932732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931650-2932340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931 650-2932340 bp Feature: gene Location: 2933250-2934413 bp Feature: domain Description: dacD Location: 2933253-2934408 bp Feature: domain Description: dacD Location: 2933253-2934408 bp Feature: gene Location: 2934594-2936018 bp Feature: domain Description: SbcB Location: 2934600-2936016 bp Feature: domain Description: SbcB Location: 2934600-293601 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088752.1 Klebsiella pneumoniae strain CHS170 genomic scaffold aetAd-supercont1.2, whole genome shotgun sequence (161912 bp)
Overview 1 RT 1: 107116-112110 bp Neighborhood of RT #1 [107116, 112112] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 107116-108387 bp Feature: domain Description: umuC Location: 107119-108382 bp Feature: domain Description: umuC Location: 107119-108382 bp Feature: gene Location: 108387-108812 bp Feature: domain Description: PRK10276 Location: 108390-108798 bp Feature: domain Description: PRK102 76 Location: 108390-108798 bp Feature: gene Location: 109215-110702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109620-110310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10962 0-110310 bp Feature: gene Location: 110936-111166 bp Feature: gene Location: 111687-112112 bp Feature: domain Description: Antirestrict Location: 111822-112110 bp Feature: domain Description: Antirestrict Location: 11182 2 -112 110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)