myRT

myRT report for GCA_001032375.1_Kleb_pneu_CHS173_V1

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Seq: KQ088761.1 Klebsiella pneumoniae strain CHS173 genomic scaffold aetyr-supercont1.1, whole genome shotgun sequence (2027723 bp)
Overview 1 RT 1: 582027-585434 bp 2 RT 2: 1024669-1030274 bp 3 RT 3: 1368044-1373462 bp 4 RT 4: 1558979-1564301 bp Neighborhood of RT #1 [582027, 585535] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024669, 1030300] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1368044, 1373464] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1558979, 1564303] PinE RVT-GII PRK10276 umuC Feature: gene Location: 582027-582758 bp Feature: domain Description: Laminin_G_3 Location: 582348-582702 bp Feature: domain Description: Laminin_G_3 Location: 582348-582702 bp Feature: gene Location: 582755-582964 bp Feature: gene Location: 583414-584901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583819-584509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58381 9-584509 bp Feature: gene Location: 584979-585218 bp Feature: gene Location: 585218-585535 bp Feature: domain Description: PRK10276 Location: 585224-585338 bp Feature: domain Description: PRK1 0276 Location: 585224-585338 bp Feature: domain Description: PRK10276 Location: 585365-585434 bp Feature: domain Description: PRK1 0276 Location: 585365-585434 bp Feature: gene Location: 1024669-1025232 bp Feature: domain Description: YbjK Location: 1024675-1025212 bp Feature: domain Description: YbjK Location: 1 024675-1 02521 2 bp Feature: gene Location: 1025355-1026407 bp Feature: domain Description: int Location: 1025358-1026357 bp Feature: domain Description: int Location: 1 025358-1 026357 bp Feature: gene Location: 1026823-1028310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027228-1027918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027228-1 02791 8 bp Feature: gene Location: 1028409-1029353 bp Feature: gene Location: 1029365-1030300 bp Feature: domain Description: Phage_CI_repr Location: 1029449-1029632 bp Feature: domain Description: Phage_CI_repr Location: 1 029449-1 029632 bp Feature: domain Description: Phage_CI_repr Location: 1029761-1029953 bp Feature: domain Description: Phage_CI_repr Location: 1 029761 -1 029953 bp Feature: domain Description: Phage_CI_C Location: 1029980-1030274 bp Feature: domain Description: Phage_CI_C Location: 1 029980-1 030274 bp Feature: gene Location: 1368044-1369183 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368227-1369127 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 368227-1 3691 27 bp Feature: gene Location: 1369354-1369596 bp Feature: domain Description: DinI Location: 1369405-1369585 bp Feature: domain Description: DinI Location: 1 369405-1 369585 bp Feature: gene Location: 1370211-1371698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370616-1371306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37061 6-1 371 306 bp Feature: gene Location: 1371777-1372196 bp Feature: domain Description: PRK10276 Location: 1371780-1372191 bp Feature: domain Description: PRK1 0276 Location: 1 371 780-1 3721 91 bp Feature: gene Location: 1372199-1373464 bp Feature: domain Description: umuC Location: 1372202-1373462 bp Feature: domain Description: umuC Location: 1 372202-1 373462 bp Feature: gene Location: 1558979-1559140 bp Feature: gene Location: 1559206-1559655 bp Feature: domain Description: PinE Location: 1559215-1559647 bp Feature: domain Description: PinE Location: 1 55921 5-1 559647 bp Feature: gene Location: 1561050-1562537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561455-1562145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 561 455-1 5621 45 bp Feature: gene Location: 1562530-1563036 bp Feature: domain Description: PRK10276 Location: 1562620-1563031 bp Feature: domain Description: PRK1 0276 Location: 1 562620-1 563031 bp Feature: gene Location: 1563038-1564303 bp Feature: domain Description: umuC Location: 1563041-1564301 bp Feature: domain Description: umuC Location: 1 563041 -1 564301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ088763.1 Klebsiella pneumoniae strain CHS173 genomic scaffold aetyr-supercont1.3, whole genome shotgun sequence (1439089 bp)
Overview 1 RT 1: 884553-891036 bp Neighborhood of RT #1 [884553, 891038] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884553-885611 bp Feature: domain Description: YccC Location: 884559-885597 bp Feature: domain Description: YccC Location: 884559-885597 bp Feature: gene Location: 885710-886183 bp Feature: domain Description: PRK10016 Location: 885713-886172 bp Feature: domain Description: PRK10016 Location: 885713-886172 bp Feature: gene Location: 886265-887752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886670-887360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886670-887360 bp Feature: gene Location: 888270-889433 bp Feature: domain Description: dacD Location: 888273-889428 bp Feature: domain Description: dacD Location: 8882 73-88942 8 bp Feature: gene Location: 889614-891038 bp Feature: domain Description: SbcB Location: 889620-891036 bp Feature: domain Description: SbcB Location: 88962 0-891036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088765.1 Klebsiella pneumoniae strain CHS173 genomic scaffold aetyr-supercont1.5, whole genome shotgun sequence (172692 bp)
Overview 1 RT 1: 115157-120151 bp Neighborhood of RT #1 [115157, 120153] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 115157-116428 bp Feature: domain Description: umuC Location: 115160-116423 bp Feature: domain Description: umuC Location: 115160-116423 bp Feature: gene Location: 116428-116853 bp Feature: domain Description: PRK10276 Location: 116431-116839 bp Feature: domain Description: PRK10276 Location: 11643 1-11683 9 bp Feature: gene Location: 117256-118743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117661-118351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117661-1183 51 bp Feature: gene Location: 118977-119207 bp Feature: gene Location: 119728-120153 bp Feature: domain Description: Antirestrict Location: 119863-120151 bp Feature: domain Description: Antirestrict Location: 119863 -120151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)