myRT

myRT report for GCA_001032435.1_Kleb_pneu_CHS176_V1

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Seq: KQ088788.1 Klebsiella pneumoniae strain CHS176 genomic scaffold aetgW-supercont1.1, whole genome shotgun sequence (1500353 bp)
Overview 1 RT 1: 979045-984650 bp 2 RT 2: 1322285-1327703 bp Neighborhood of RT #1 [979045, 984676] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1322285, 1327705] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 979045-979608 bp Feature: domain Description: YbjK Location: 979051-979588 bp Feature: domain Description: YbjK Location: 979051 -979588 bp Feature: gene Location: 979731-980783 bp Feature: domain Description: int Location: 979734-980733 bp Feature: domain Description: int Location: 979734-980733 bp Feature: gene Location: 981199-982686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981604-982294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981 604-982294 bp Feature: gene Location: 982785-983729 bp Feature: gene Location: 983741-984676 bp Feature: domain Description: Phage_CI_repr Location: 983825-984008 bp Feature: domain Description: Phage_CI_repr Location: 983825-984008 bp Feature: domain Description: Phage_CI_repr Location: 984137-984329 bp Feature: domain Description: Phage_CI_repr Location: 9841 37-984329 bp Feature: domain Description: Phage_CI_C Location: 984356-984650 bp Feature: domain Description: Phage_CI_C Location: 984356-984650 bp Feature: gene Location: 1322285-1323424 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1322468-1323368 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 322468-1 323368 bp Feature: gene Location: 1323595-1323837 bp Feature: domain Description: DinI Location: 1323646-1323826 bp Feature: domain Description: DinI Location: 1 323646-1 323826 bp Feature: gene Location: 1324452-1325939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1324857-1325547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 324857-1 325547 bp Feature: gene Location: 1326018-1326437 bp Feature: domain Description: PRK10276 Location: 1326021-1326432 bp Feature: domain Description: PRK1 0276 Location: 1 326021 -1 326432 bp Feature: gene Location: 1326440-1327705 bp Feature: domain Description: umuC Location: 1326443-1327703 bp Feature: domain Description: umuC Location: 1 326443-1 327703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088789.1 Klebsiella pneumoniae strain CHS176 genomic scaffold aetgW-supercont1.2, whole genome shotgun sequence (1435414 bp)
Overview 1 RT 1: 883384-889867 bp Neighborhood of RT #1 [883384, 889869] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883384-884442 bp Feature: domain Description: YccC Location: 883390-884428 bp Feature: domain Description: YccC Location: 883390-88442 8 bp Feature: gene Location: 884541-885014 bp Feature: domain Description: PRK10016 Location: 884544-885003 bp Feature: domain Description: PRK10016 Location: 884544-885003 bp Feature: gene Location: 885096-886583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885501-886191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885501-886191 bp Feature: gene Location: 887101-888264 bp Feature: domain Description: dacD Location: 887104-888259 bp Feature: domain Description: dacD Location: 887104-8882 59 bp Feature: gene Location: 888445-889869 bp Feature: domain Description: SbcB Location: 888451-889867 bp Feature: domain Description: SbcB Location: 888451-889867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088794.1 Klebsiella pneumoniae strain CHS176 genomic scaffold aetgW-supercont1.7, whole genome shotgun sequence (193289 bp)
Overview 1 RT 1: 135705-140699 bp Neighborhood of RT #1 [135705, 140701] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 135705-136976 bp Feature: domain Description: umuC Location: 135708-136971 bp Feature: domain Description: umuC Location: 13 5708-13 6971 bp Feature: gene Location: 136976-137401 bp Feature: domain Description: PRK10276 Location: 136979-137387 bp Feature: domain Description: PRK10276 Location: 13 6979-13 73 87 bp Feature: gene Location: 137804-139291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138209-138899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 8209-13 8899 bp Feature: gene Location: 139525-139755 bp Feature: gene Location: 140276-140701 bp Feature: domain Description: Antirestrict Location: 140411-140699 bp Feature: domain Description: Antirestrict Location: 140411-140699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)