myRT

myRT report for GCA_001032445.1_Kleb_pneu_CHS177_V1

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Seq: KQ088798.1 Klebsiella pneumoniae strain CHS177 genomic scaffold aetzU-supercont1.1, whole genome shotgun sequence (2293297 bp)
Overview 1 RT 1: 890578-897061 bp Neighborhood of RT #1 [890578, 897063] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 890578-891636 bp Feature: domain Description: YccC Location: 890584-891622 bp Feature: domain Description: YccC Location: 890584-891 622 bp Feature: gene Location: 891735-892208 bp Feature: domain Description: PRK10016 Location: 891738-892197 bp Feature: domain Description: PRK1 001 6 Location: 891 738-8921 97 bp Feature: gene Location: 892290-893777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892695-893385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892695-893385 bp Feature: gene Location: 894295-895458 bp Feature: domain Description: dacD Location: 894298-895453 bp Feature: domain Description: dacD Location: 894298-895453 bp Feature: gene Location: 895639-897063 bp Feature: domain Description: SbcB Location: 895645-897061 bp Feature: domain Description: SbcB Location: 895645-897061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088802.1 Klebsiella pneumoniae strain CHS177 genomic scaffold aetzU-supercont1.5, whole genome shotgun sequence (493735 bp)
Overview 1 RT 1: 10022-15887 bp Neighborhood of RT #1 [10022, 15889] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 10022-10726 bp Feature: domain Description: Rve Location: 10025-10670 bp Feature: domain Description: Rve Location: 1002 5-10670 bp Feature: gene Location: 10792-11241 bp Feature: domain Description: PinE Location: 10801-11233 bp Feature: domain Description: PinE Location: 10801-112 33 bp Feature: gene Location: 12636-14123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13041-13731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13041-13731 bp Feature: gene Location: 14116-14622 bp Feature: domain Description: PRK10276 Location: 14206-14617 bp Feature: domain Description: PRK102 76 Location: 142 06-14617 bp Feature: gene Location: 14624-15889 bp Feature: domain Description: umuC Location: 14627-15887 bp Feature: domain Description: umuC Location: 1462 7-15887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088803.1 Klebsiella pneumoniae strain CHS177 genomic scaffold aetzU-supercont1.6, whole genome shotgun sequence (151639 bp)
Overview 1 RT 1: 2407-7401 bp Neighborhood of RT #1 [2407, 7403] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 2407-3678 bp Feature: domain Description: umuC Location: 2410-3673 bp Feature: domain Description: umuC Location: 2410-3 673 bp Feature: gene Location: 3678-4103 bp Feature: domain Description: PRK10276 Location: 3681-4089 bp Feature: domain Description: PRK10276 Location: 3 681-4089 bp Feature: gene Location: 4506-5993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4911-5601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4911-5601 bp Feature: gene Location: 6227-6457 bp Feature: gene Location: 6978-7403 bp Feature: domain Description: Antirestrict Location: 7113-7401 bp Feature: domain Description: Antirestrict Location: 7113 -7401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088799.1 Klebsiella pneumoniae strain CHS177 genomic scaffold aetzU-supercont1.2, whole genome shotgun sequence (1517262 bp)
Overview 1 RT 1: 584423-587830 bp 2 RT 2: 1028528-1034133 bp 3 RT 3: 1371912-1377330 bp Neighborhood of RT #1 [584423, 587931] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028528, 1034159] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371912, 1377332] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 584423-585154 bp Feature: domain Description: Laminin_G_3 Location: 584744-585098 bp Feature: domain Description: Laminin_G_3 Location: 584 74 4 -585098 bp Feature: gene Location: 585151-585360 bp Feature: gene Location: 585810-587297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586215-586905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586215-586905 bp Feature: gene Location: 587375-587614 bp Feature: gene Location: 587614-587931 bp Feature: domain Description: PRK10276 Location: 587620-587734 bp Feature: domain Description: PRK10276 Location: 587620-587734 bp Feature: domain Description: PRK10276 Location: 587761-587830 bp Feature: domain Description: PRK10276 Location: 587761-587830 bp Feature: gene Location: 1028528-1029091 bp Feature: domain Description: YbjK Location: 1028534-1029071 bp Feature: domain Description: YbjK Location: 1028534 -1029071 bp Feature: gene Location: 1029214-1030266 bp Feature: domain Description: int Location: 1029217-1030216 bp Feature: domain Description: int Location: 1029217-1030216 bp Feature: gene Location: 1030682-1032169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031087-1031777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031087-1031777 bp Feature: gene Location: 1032268-1033212 bp Feature: gene Location: 1033224-1034159 bp Feature: domain Description: Phage_CI_repr Location: 1033308-1033491 bp Feature: domain Description: Phage_CI_repr Location: 1033308-10334 91 bp Feature: domain Description: Phage_CI_repr Location: 1033620-1033812 bp Feature: domain Description: Phage_CI_repr Location: 1033620-1033812 bp Feature: domain Description: Phage_CI_C Location: 1033839-1034133 bp Feature: domain Description: Phage_CI_C Location: 1033839-1034 133 bp Feature: gene Location: 1371912-1373051 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372095-1372995 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372095-1372995 bp Feature: gene Location: 1373222-1373464 bp Feature: domain Description: DinI Location: 1373273-1373453 bp Feature: domain Description: DinI Location: 1373273-13734 53 bp Feature: gene Location: 1374079-1375566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374484-1375174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374 4 84 -1375174 bp Feature: gene Location: 1375645-1376064 bp Feature: domain Description: PRK10276 Location: 1375648-1376059 bp Feature: domain Description: PRK10276 Location: 137564 8-1376059 bp Feature: gene Location: 1376067-1377332 bp Feature: domain Description: umuC Location: 1376070-1377330 bp Feature: domain Description: umuC Location: 1376070-1377330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ088804.1 Klebsiella pneumoniae strain CHS177 genomic scaffold aetzU-supercont1.7, whole genome shotgun sequence (73591 bp)
Overview 1 RT 1: 27865-33218 bp Neighborhood of RT #1 [27865, 33355] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 27865-29136 bp Feature: domain Description: umuC Location: 27868-29128 bp Feature: domain Description: umuC Location: 27868-29128 bp Feature: gene Location: 29136-29567 bp Feature: domain Description: PRK10276 Location: 29187-29550 bp Feature: domain Description: PRK10276 Location: 29187-295 5 0 bp Feature: gene Location: 29650-31137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30055-30745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005 5 -30745 bp Feature: gene Location: 31710-32681 bp Feature: domain Description: StbA Location: 31713-32658 bp Feature: domain Description: StbA Location: 31713-3265 8 bp Feature: gene Location: 32684-33355 bp Feature: domain Description: Plasmid_stab_B Location: 32699-32906 bp Feature: domain Description: Plasmid_stab_B Location: 32699-32906 bp Feature: domain Description: Plasmid_stab_B Location: 33011-33218 bp Feature: domain Description: Plasmid_stab_B Location: 33011-33218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)