myRT

myRT report for GCA_001032505.1_Kleb_pneu_CHS181_V1

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Seq: KQ088808.1 Klebsiella pneumoniae strain CHS181 genomic scaffold aetzJ-supercont1.1, whole genome shotgun sequence (2799340 bp)
Overview 1 RT 1: 888492-894975 bp Neighborhood of RT #1 [888492, 894977] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 888492-889550 bp Feature: domain Description: YccC Location: 888498-889536 bp Feature: domain Description: YccC Location: 888498-889536 bp Feature: gene Location: 889649-890122 bp Feature: domain Description: PRK10016 Location: 889652-890111 bp Feature: domain Description: PRK1 001 6 Location: 889652-8901 1 1 bp Feature: gene Location: 890204-891691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890609-891299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890609-891 299 bp Feature: gene Location: 892209-893372 bp Feature: domain Description: dacD Location: 892212-893367 bp Feature: domain Description: dacD Location: 89221 2-893367 bp Feature: gene Location: 893553-894977 bp Feature: domain Description: SbcB Location: 893559-894975 bp Feature: domain Description: SbcB Location: 893559-894975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088810.1 Klebsiella pneumoniae strain CHS181 genomic scaffold aetzJ-supercont1.3, whole genome shotgun sequence (473847 bp)
Overview 1 RT 1: 106-5201 bp Neighborhood of RT #1 [106, 5203] PinE RVT-GII PRK10276 umuC Feature: gene Location: 106-555 bp Feature: domain Description: PinE Location: 115-547 bp Feature: domain Description: PinE Location: 115-547 bp Feature: gene Location: 1950-3437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2355-3045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 355-3045 bp Feature: gene Location: 3430-3936 bp Feature: domain Description: PRK10276 Location: 3520-3931 bp Feature: domain Description: PRK102 76 Location: 352 0-3931 bp Feature: gene Location: 3938-5203 bp Feature: domain Description: umuC Location: 3941-5201 bp Feature: domain Description: umuC Location: 3941-52 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088814.1 Klebsiella pneumoniae strain CHS181 genomic scaffold aetzJ-supercont1.7, whole genome shotgun sequence (175208 bp)
Overview 1 RT 1: 117624-122618 bp Neighborhood of RT #1 [117624, 122620] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117624-118895 bp Feature: domain Description: umuC Location: 117627-118890 bp Feature: domain Description: umuC Location: 117627-118890 bp Feature: gene Location: 118895-119320 bp Feature: domain Description: PRK10276 Location: 118898-119306 bp Feature: domain Description: PRK10276 Location: 118898-1193 06 bp Feature: gene Location: 119723-121210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120128-120818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120128-120818 bp Feature: gene Location: 121444-121674 bp Feature: gene Location: 122195-122620 bp Feature: domain Description: Antirestrict Location: 122330-122618 bp Feature: domain Description: Antirestrict Location: 1223 3 0-122618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088809.1 Klebsiella pneumoniae strain CHS181 genomic scaffold aetzJ-supercont1.2, whole genome shotgun sequence (1301999 bp)
Overview 1 RT 1: 330987-334394 bp 2 RT 2: 773629-779234 bp 3 RT 3: 1117709-1123127 bp Neighborhood of RT #1 [330987, 334495] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [773629, 779260] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1117709, 1123129] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 330987-331718 bp Feature: domain Description: Laminin_G_3 Location: 331308-331662 bp Feature: domain Description: Laminin_G_3 Location: 331308-331662 bp Feature: gene Location: 331715-331924 bp Feature: gene Location: 332374-333861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332779-333469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332779-3334 69 bp Feature: gene Location: 333939-334178 bp Feature: gene Location: 334178-334495 bp Feature: domain Description: PRK10276 Location: 334184-334298 bp Feature: domain Description: PRK10276 Location: 334 184 -334 298 bp Feature: domain Description: PRK10276 Location: 334325-334394 bp Feature: domain Description: PRK10276 Location: 334 325-334 394 bp Feature: gene Location: 773629-774192 bp Feature: domain Description: YbjK Location: 773635-774172 bp Feature: domain Description: YbjK Location: 773635-774 172 bp Feature: gene Location: 774315-775367 bp Feature: domain Description: int Location: 774318-775317 bp Feature: domain Description: int Location: 774 318-775317 bp Feature: gene Location: 775783-777270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776188-776878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776188-776878 bp Feature: gene Location: 777369-778313 bp Feature: gene Location: 778325-779260 bp Feature: domain Description: Phage_CI_repr Location: 778409-778592 bp Feature: domain Description: Phage_CI_repr Location: 7784 09-778592 bp Feature: domain Description: Phage_CI_repr Location: 778721-778913 bp Feature: domain Description: Phage_CI_repr Location: 778721-778913 bp Feature: domain Description: Phage_CI_C Location: 778940-779234 bp Feature: domain Description: Phage_CI_C Location: 77894 0-779234 bp Feature: gene Location: 1117709-1118848 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117892-1118792 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117892-1118792 bp Feature: gene Location: 1119019-1119261 bp Feature: domain Description: DinI Location: 1119070-1119250 bp Feature: domain Description: DinI Location: 1119070-1119250 bp Feature: gene Location: 1119876-1121363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120281-1120971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120281-1120971 bp Feature: gene Location: 1121442-1121861 bp Feature: domain Description: PRK10276 Location: 1121445-1121856 bp Feature: domain Description: PRK10276 Location: 11214 4 5-1121856 bp Feature: gene Location: 1121864-1123129 bp Feature: domain Description: umuC Location: 1121867-1123127 bp Feature: domain Description: umuC Location: 1121867-1123127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)