myRT

myRT report for GCA_001032525.1_Kleb_pneu_CHS182_V1

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Seq: KQ088824.1 Klebsiella pneumoniae strain CHS182 genomic scaffold aetzu-supercont1.5, whole genome shotgun sequence (167574 bp)
Overview 1 RT 1: 82498-87492 bp Neighborhood of RT #1 [82498, 87494] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82498-83769 bp Feature: domain Description: umuC Location: 82501-83764 bp Feature: domain Description: umuC Location: 82501 -83764 bp Feature: gene Location: 83769-84194 bp Feature: domain Description: PRK10276 Location: 83772-84180 bp Feature: domain Description: PRK1 0276 Location: 83772-841 80 bp Feature: gene Location: 84597-86084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85002-85692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85002-85692 bp Feature: gene Location: 86318-86548 bp Feature: gene Location: 87069-87494 bp Feature: domain Description: Antirestrict Location: 87204-87492 bp Feature: domain Description: Antirestrict Location: 87204-87492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088820.1 Klebsiella pneumoniae strain CHS182 genomic scaffold aetzu-supercont1.1, whole genome shotgun sequence (3481087 bp)
Overview 1 RT 1: 583504-586911 bp 2 RT 2: 1026448-1032053 bp 3 RT 3: 1369806-1375224 bp 4 RT 4: 1553333-1559198 bp 5 RT 5: 2928146-2934629 bp Neighborhood of RT #1 [583504, 587012] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026448, 1032079] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369806, 1375226] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553333, 1559200] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2928146, 2934631] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583504-584235 bp Feature: domain Description: Laminin_G_3 Location: 583825-584179 bp Feature: domain Description: Laminin_G_3 Location: 58382 5-584179 bp Feature: gene Location: 584232-584441 bp Feature: gene Location: 584891-586378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585296-585986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5852 96-585986 bp Feature: gene Location: 586456-586695 bp Feature: gene Location: 586695-587012 bp Feature: domain Description: PRK10276 Location: 586701-586815 bp Feature: domain Description: PRK102 76 Location: 586701-586815 bp Feature: domain Description: PRK10276 Location: 586842-586911 bp Feature: domain Description: PRK102 76 Location: 586842 -586911 bp Feature: gene Location: 1026448-1027011 bp Feature: domain Description: YbjK Location: 1026454-1026991 bp Feature: domain Description: YbjK Location: 102 6454-102 6991 bp Feature: gene Location: 1027134-1028186 bp Feature: domain Description: int Location: 1027137-1028136 bp Feature: domain Description: int Location: 102 7137-102 8136 bp Feature: gene Location: 1028602-1030089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029007-1029697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 9007-102 9697 bp Feature: gene Location: 1030188-1031132 bp Feature: gene Location: 1031144-1032079 bp Feature: domain Description: Phage_CI_repr Location: 1031228-1031411 bp Feature: domain Description: Phage_CI_repr Location: 10312 2 8-1031411 bp Feature: domain Description: Phage_CI_repr Location: 1031540-1031732 bp Feature: domain Description: Phage_CI_repr Location: 1031540-1031732 bp Feature: domain Description: Phage_CI_C Location: 1031759-1032053 bp Feature: domain Description: Phage_CI_C Location: 1031759-1032 053 bp Feature: gene Location: 1369806-1370945 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369989-1370889 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369989-1370889 bp Feature: gene Location: 1371116-1371358 bp Feature: domain Description: DinI Location: 1371167-1371347 bp Feature: domain Description: DinI Location: 1371167-1371347 bp Feature: gene Location: 1371973-1373460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372378-1373068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 378-1373068 bp Feature: gene Location: 1373539-1373958 bp Feature: domain Description: PRK10276 Location: 1373542-1373953 bp Feature: domain Description: PRK102 76 Location: 1373542 -1373953 bp Feature: gene Location: 1373961-1375226 bp Feature: domain Description: umuC Location: 1373964-1375224 bp Feature: domain Description: umuC Location: 1373964-13752 2 4 bp Feature: gene Location: 1553333-1554037 bp Feature: domain Description: Rve Location: 1553336-1553981 bp Feature: domain Description: Rve Location: 1553336-1553981 bp Feature: gene Location: 1554103-1554552 bp Feature: domain Description: PinE Location: 1554112-1554544 bp Feature: domain Description: PinE Location: 1554112 -1554544 bp Feature: gene Location: 1555947-1557434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556352-1557042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556352 -1557042 bp Feature: gene Location: 1557427-1557933 bp Feature: domain Description: PRK10276 Location: 1557517-1557928 bp Feature: domain Description: PRK102 76 Location: 1557517-155792 8 bp Feature: gene Location: 1557935-1559200 bp Feature: domain Description: umuC Location: 1557938-1559198 bp Feature: domain Description: umuC Location: 1557938-1559198 bp Feature: gene Location: 2928146-2929204 bp Feature: domain Description: YccC Location: 2928152-2929190 bp Feature: domain Description: YccC Location: 2 92 8152 -2 92 9190 bp Feature: gene Location: 2929303-2929776 bp Feature: domain Description: PRK10016 Location: 2929306-2929765 bp Feature: domain Description: PRK10016 Location: 2 92 9306-2 92 9765 bp Feature: gene Location: 2929858-2931345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930263-2930953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9302 63-2 930953 bp Feature: gene Location: 2931863-2933026 bp Feature: domain Description: dacD Location: 2931866-2933021 bp Feature: domain Description: dacD Location: 2 931866-2 93302 1 bp Feature: gene Location: 2933207-2934631 bp Feature: domain Description: SbcB Location: 2933213-2934629 bp Feature: domain Description: SbcB Location: 2 9332 13-2 93462 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088825.1 Klebsiella pneumoniae strain CHS182 genomic scaffold aetzu-supercont1.6, whole genome shotgun sequence (61278 bp)
Overview 1 RT 1: 13470-18823 bp Neighborhood of RT #1 [13470, 18960] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13470-14741 bp Feature: domain Description: umuC Location: 13473-14733 bp Feature: domain Description: umuC Location: 13 473 -1473 3 bp Feature: gene Location: 14741-15172 bp Feature: domain Description: PRK10276 Location: 14792-15155 bp Feature: domain Description: PRK10276 Location: 14792-15155 bp Feature: gene Location: 15255-16742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15660-16350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15660-163 50 bp Feature: gene Location: 17315-18286 bp Feature: domain Description: StbA Location: 17318-18263 bp Feature: domain Description: StbA Location: 173 18-18263 bp Feature: gene Location: 18289-18960 bp Feature: domain Description: Plasmid_stab_B Location: 18304-18511 bp Feature: domain Description: Plasmid_stab_B Location: 183 04-18511 bp Feature: domain Description: Plasmid_stab_B Location: 18616-18823 bp Feature: domain Description: Plasmid_stab_B Location: 18616-18823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)