myRT

myRT report for GCA_001032535.1_Kleb_pneu_CHS183_V1

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Seq: KQ088847.1 Klebsiella pneumoniae strain CHS183 genomic scaffold aetyG-supercont1.6, whole genome shotgun sequence (167920 bp)
Overview 1 RT 1: 72821-77815 bp Neighborhood of RT #1 [72821, 77817] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 72821-74092 bp Feature: domain Description: umuC Location: 72824-74087 bp Feature: domain Description: umuC Location: 72824-74087 bp Feature: gene Location: 74092-74517 bp Feature: domain Description: PRK10276 Location: 74095-74503 bp Feature: domain Description: PRK1 0276 Location: 74095-74503 bp Feature: gene Location: 74920-76407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75325-76015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75325-7601 5 bp Feature: gene Location: 76641-76871 bp Feature: gene Location: 77392-77817 bp Feature: domain Description: Antirestrict Location: 77527-77815 bp Feature: domain Description: Antirestrict Location: 77527-7781 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088842.1 Klebsiella pneumoniae strain CHS183 genomic scaffold aetyG-supercont1.1, whole genome shotgun sequence (3286321 bp)
Overview 1 RT 1: 334502-337909 bp 2 RT 2: 777263-782868 bp 3 RT 3: 1120912-1126330 bp 4 RT 4: 1304439-1310304 bp 5 RT 5: 2729680-2736163 bp 6 RT 6: 3180703-3184184 bp Neighborhood of RT #1 [334502, 338010] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [777263, 782894] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1120912, 1126332] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1304439, 1310306] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2729680, 2736165] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [3180703, 3184184] Terminase_2 RVT-GII Feature: gene Location: 334502-335233 bp Feature: domain Description: Laminin_G_3 Location: 334823-335177 bp Feature: domain Description: Laminin_G_3 Location: 33482 3-335177 bp Feature: gene Location: 335230-335439 bp Feature: gene Location: 335889-337376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336294-336984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3362 94-336984 bp Feature: gene Location: 337454-337693 bp Feature: gene Location: 337693-338010 bp Feature: domain Description: PRK10276 Location: 337699-337813 bp Feature: domain Description: PRK102 76 Location: 337699-337813 bp Feature: domain Description: PRK10276 Location: 337840-337909 bp Feature: domain Description: PRK102 76 Location: 337840-337909 bp Feature: gene Location: 777263-777826 bp Feature: domain Description: YbjK Location: 777269-777806 bp Feature: domain Description: YbjK Location: 7772 69-777806 bp Feature: gene Location: 777949-779001 bp Feature: domain Description: int Location: 777952-778951 bp Feature: domain Description: int Location: 777952 -778951 bp Feature: gene Location: 779417-780904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779822-780512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77982 2 -780512 bp Feature: gene Location: 781003-781947 bp Feature: gene Location: 781959-782894 bp Feature: domain Description: Phage_CI_repr Location: 782043-782226 bp Feature: domain Description: Phage_CI_repr Location: 782 043-782 2 2 6 bp Feature: domain Description: Phage_CI_repr Location: 782355-782547 bp Feature: domain Description: Phage_CI_repr Location: 782 355-782 547 bp Feature: domain Description: Phage_CI_C Location: 782574-782868 bp Feature: domain Description: Phage_CI_C Location: 782 574-782 868 bp Feature: gene Location: 1120912-1122051 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1121095-1121995 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 112 1095-112 1995 bp Feature: gene Location: 1122222-1122464 bp Feature: domain Description: DinI Location: 1122273-1122453 bp Feature: domain Description: DinI Location: 112 2 2 73-112 2 453 bp Feature: gene Location: 1123079-1124566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123484-1124174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 3484-112 4174 bp Feature: gene Location: 1124645-1125064 bp Feature: domain Description: PRK10276 Location: 1124648-1125059 bp Feature: domain Description: PRK102 76 Location: 112 4648-112 5059 bp Feature: gene Location: 1125067-1126332 bp Feature: domain Description: umuC Location: 1125070-1126330 bp Feature: domain Description: umuC Location: 112 5070-112 6330 bp Feature: gene Location: 1304439-1305143 bp Feature: domain Description: Rve Location: 1304442-1305087 bp Feature: domain Description: Rve Location: 1304442 -1305087 bp Feature: gene Location: 1305209-1305658 bp Feature: domain Description: PinE Location: 1305218-1305650 bp Feature: domain Description: PinE Location: 13052 18-1305650 bp Feature: gene Location: 1307053-1308540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307458-1308148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307458-1308148 bp Feature: gene Location: 1308533-1309039 bp Feature: domain Description: PRK10276 Location: 1308623-1309034 bp Feature: domain Description: PRK102 76 Location: 130862 3-1309034 bp Feature: gene Location: 1309041-1310306 bp Feature: domain Description: umuC Location: 1309044-1310304 bp Feature: domain Description: umuC Location: 1309044-1310304 bp Feature: gene Location: 2729680-2730738 bp Feature: domain Description: YccC Location: 2729686-2730724 bp Feature: domain Description: YccC Location: 2 72 9686-2 73072 4 bp Feature: gene Location: 2730837-2731310 bp Feature: domain Description: PRK10016 Location: 2730840-2731299 bp Feature: domain Description: PRK10016 Location: 2 730840-2 7312 99 bp Feature: gene Location: 2731392-2732879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2731797-2732487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 731797-2 732 487 bp Feature: gene Location: 2733397-2734560 bp Feature: domain Description: dacD Location: 2733400-2734555 bp Feature: domain Description: dacD Location: 2 733400-2 734555 bp Feature: gene Location: 2734741-2736165 bp Feature: domain Description: SbcB Location: 2734747-2736163 bp Feature: domain Description: SbcB Location: 2 734747-2 736163 bp Feature: gene Location: 3180703-3181287 bp Feature: domain Description: Terminase_2 Location: 3180748-3181213 bp Feature: domain Description: Terminase_2 Location: 3180748-31812 13 bp Feature: gene Location: 3181365-3181622 bp Feature: gene Location: 3182023-3183510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3182428-3183118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3182 42 8-3183118 bp Feature: gene Location: 3183607-3183945 bp Feature: gene Location: 3183945-3184184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)

Seq: KQ088851.1 Klebsiella pneumoniae strain CHS183 genomic scaffold aetyG-supercont1.10, whole genome shotgun sequence (86347 bp)
Overview 1 RT 1: 31651-37004 bp Neighborhood of RT #1 [31651, 37141] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 31651-32922 bp Feature: domain Description: umuC Location: 31654-32914 bp Feature: domain Description: umuC Location: 3 1654-3 2914 bp Feature: gene Location: 32922-33353 bp Feature: domain Description: PRK10276 Location: 32973-33336 bp Feature: domain Description: PRK10276 Location: 3 2973 -3 3 3 3 6 bp Feature: gene Location: 33436-34923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33841-34531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 841-3 453 1 bp Feature: gene Location: 35496-36467 bp Feature: domain Description: StbA Location: 35499-36444 bp Feature: domain Description: StbA Location: 3 5499-3 6444 bp Feature: gene Location: 36470-37141 bp Feature: domain Description: Plasmid_stab_B Location: 36485-36692 bp Feature: domain Description: Plasmid_stab_B Location: 3 6485-3 6692 bp Feature: domain Description: Plasmid_stab_B Location: 36797-37004 bp Feature: domain Description: Plasmid_stab_B Location: 3 6797-3 7004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)