myRT

myRT report for GCA_001032615.1_Kleb_pneu_CHS189_V1

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Seq: KQ088861.1 Klebsiella pneumoniae strain CHS189 genomic scaffold aetzY-supercont1.1, whole genome shotgun sequence (2815189 bp)
Overview 1 RT 1: 439924-445529 bp 2 RT 2: 760358-765776 bp 3 RT 3: 2260463-2266946 bp Neighborhood of RT #1 [439924, 445555] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [760358, 765778] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2260463, 2266948] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 439924-440487 bp Feature: domain Description: YbjK Location: 439930-440467 bp Feature: domain Description: YbjK Location: 439930-440467 bp Feature: gene Location: 440610-441662 bp Feature: domain Description: int Location: 440613-441612 bp Feature: domain Description: int Location: 44061 3-441 61 2 bp Feature: gene Location: 442081-443565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442483-443173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442483-4431 73 bp Feature: gene Location: 443664-444608 bp Feature: gene Location: 444620-445555 bp Feature: domain Description: Phage_CI_repr Location: 444704-444887 bp Feature: domain Description: Phage_CI_repr Location: 444704-444887 bp Feature: domain Description: Phage_CI_repr Location: 445016-445208 bp Feature: domain Description: Phage_CI_repr Location: 44501 6-445208 bp Feature: domain Description: Phage_CI_C Location: 445235-445529 bp Feature: domain Description: Phage_CI_C Location: 445235-445529 bp Feature: gene Location: 760358-761497 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 760541-761441 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 760541 -761 441 bp Feature: gene Location: 761668-761910 bp Feature: domain Description: DinI Location: 761719-761899 bp Feature: domain Description: DinI Location: 761 71 9-761 899 bp Feature: gene Location: 762528-764012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762930-763620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762930-763620 bp Feature: gene Location: 764091-764510 bp Feature: domain Description: PRK10276 Location: 764094-764505 bp Feature: domain Description: PRK1 0276 Location: 764094-764505 bp Feature: gene Location: 764513-765778 bp Feature: domain Description: umuC Location: 764516-765776 bp Feature: domain Description: umuC Location: 76451 6-765776 bp Feature: gene Location: 2260463-2261521 bp Feature: domain Description: YccC Location: 2260469-2261507 bp Feature: domain Description: YccC Location: 2260469-2261 507 bp Feature: gene Location: 2261620-2262093 bp Feature: domain Description: PRK10016 Location: 2261623-2262082 bp Feature: domain Description: PRK1 001 6 Location: 2261 623-2262082 bp Feature: gene Location: 2262175-2263659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262577-2263267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262577-2263267 bp Feature: gene Location: 2264180-2265343 bp Feature: domain Description: dacD Location: 2264183-2265338 bp Feature: domain Description: dacD Location: 22641 83-2265338 bp Feature: gene Location: 2265524-2266948 bp Feature: domain Description: SbcB Location: 2265530-2266946 bp Feature: domain Description: SbcB Location: 2265530-2266946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)