myRT

myRT report for GCA_001032625.1_Kleb_pneu_CHS191_V1

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Seq: KQ088874.1 Klebsiella pneumoniae strain CHS191 genomic scaffold aetgD-supercont1.4, whole genome shotgun sequence (228500 bp)
Overview 1 RT 1: 10779-16132 bp 2 RT 2: 156930-161924 bp Neighborhood of RT #1 [10779, 16269] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Neighborhood of RT #2 [156930, 161926] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 10779-12050 bp Feature: domain Description: umuC Location: 10782-12042 bp Feature: domain Description: umuC Location: 1 0782-1 2042 bp Feature: gene Location: 12050-12481 bp Feature: domain Description: PRK10276 Location: 12101-12464 bp Feature: domain Description: PRK1 0276 Location: 1 21 01 -1 2464 bp Feature: gene Location: 12564-14051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12969-13659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2969-1 3659 bp Feature: gene Location: 14624-15595 bp Feature: domain Description: StbA Location: 14627-15572 bp Feature: domain Description: StbA Location: 1 4627-1 5572 bp Feature: gene Location: 15598-16269 bp Feature: domain Description: Plasmid_stab_B Location: 15613-15820 bp Feature: domain Description: Plasmid_stab_B Location: 1 561 3-1 5820 bp Feature: domain Description: Plasmid_stab_B Location: 15925-16132 bp Feature: domain Description: Plasmid_stab_B Location: 1 5925-1 61 32 bp Feature: gene Location: 156930-158201 bp Feature: domain Description: umuC Location: 156933-158196 bp Feature: domain Description: umuC Location: 1 56933-1 581 96 bp Feature: gene Location: 158201-158626 bp Feature: domain Description: PRK10276 Location: 158204-158612 bp Feature: domain Description: PRK1 0276 Location: 1 58204-1 5861 2 bp Feature: gene Location: 159029-160516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159434-160124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 59434-1 601 24 bp Feature: gene Location: 160750-160980 bp Feature: gene Location: 161501-161926 bp Feature: domain Description: Antirestrict Location: 161636-161924 bp Feature: domain Description: Antirestrict Location: 1 61 636-1 61 924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784), Antirestrict (pfam03230)

Seq: KQ088871.1 Klebsiella pneumoniae strain CHS191 genomic scaffold aetgD-supercont1.1, whole genome shotgun sequence (2793439 bp)
Overview 1 RT 1: 885826-892309 bp Neighborhood of RT #1 [885826, 892311] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 885826-886884 bp Feature: domain Description: YccC Location: 885832-886870 bp Feature: domain Description: YccC Location: 885832 -886870 bp Feature: gene Location: 886983-887456 bp Feature: domain Description: PRK10016 Location: 886986-887445 bp Feature: domain Description: PRK10016 Location: 886986-887445 bp Feature: gene Location: 887538-889025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887943-888633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887943-888633 bp Feature: gene Location: 889543-890706 bp Feature: domain Description: dacD Location: 889546-890701 bp Feature: domain Description: dacD Location: 889546-890701 bp Feature: gene Location: 890887-892311 bp Feature: domain Description: SbcB Location: 890893-892309 bp Feature: domain Description: SbcB Location: 890893-892 309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088872.1 Klebsiella pneumoniae strain CHS191 genomic scaffold aetgD-supercont1.2, whole genome shotgun sequence (2050690 bp)
Overview 1 RT 1: 1028295-1033900 bp 2 RT 2: 1373703-1378405 bp Neighborhood of RT #1 [1028295, 1033926] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1373703, 1378407] DinI RVT-GII PRK10276 umuC Feature: gene Location: 1028295-1028858 bp Feature: domain Description: YbjK Location: 1028301-1028838 bp Feature: domain Description: YbjK Location: 10283 01-102883 8 bp Feature: gene Location: 1028981-1030033 bp Feature: domain Description: int Location: 1028984-1029983 bp Feature: domain Description: int Location: 1028984-1029983 bp Feature: gene Location: 1030449-1031936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030854-1031544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 0854-103 1544 bp Feature: gene Location: 1032035-1032979 bp Feature: gene Location: 1032991-1033926 bp Feature: domain Description: Phage_CI_repr Location: 1033075-1033258 bp Feature: domain Description: Phage_CI_repr Location: 103 3 075-103 3 258 bp Feature: domain Description: Phage_CI_repr Location: 1033387-1033579 bp Feature: domain Description: Phage_CI_repr Location: 103 3 3 87-103 3 579 bp Feature: domain Description: Phage_CI_C Location: 1033606-1033900 bp Feature: domain Description: Phage_CI_C Location: 103 3 606-103 3 900 bp Feature: gene Location: 1373703-1373945 bp Feature: domain Description: DinI Location: 1373754-1373934 bp Feature: domain Description: DinI Location: 13 73 754-13 73 93 4 bp Feature: gene Location: 1374495-1374704 bp Feature: gene Location: 1375154-1376641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375559-1376249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 75559-13 76249 bp Feature: gene Location: 1376720-1377139 bp Feature: domain Description: PRK10276 Location: 1376723-1377134 bp Feature: domain Description: PRK10276 Location: 13 76723 -13 7713 4 bp Feature: gene Location: 1377142-1378407 bp Feature: domain Description: umuC Location: 1377145-1378405 bp Feature: domain Description: umuC Location: 13 77145-13 78405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)