myRT

myRT report for GCA_001032665.1_Kleb_pneu_CHS192_V1

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Seq: KQ088891.1 Klebsiella pneumoniae strain CHS192 genomic scaffold aetzn-supercont1.5, whole genome shotgun sequence (143177 bp)
Overview 1 RT 1: 85592-90586 bp Neighborhood of RT #1 [85592, 90588] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 85592-86863 bp Feature: domain Description: umuC Location: 85595-86858 bp Feature: domain Description: umuC Location: 85595-86858 bp Feature: gene Location: 86863-87288 bp Feature: domain Description: PRK10276 Location: 86866-87274 bp Feature: domain Description: PRK1 0276 Location: 86866-87274 bp Feature: gene Location: 87691-89178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88096-88786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88096-88786 bp Feature: gene Location: 89412-89642 bp Feature: gene Location: 90163-90588 bp Feature: domain Description: Antirestrict Location: 90298-90586 bp Feature: domain Description: Antirestrict Location: 90298-90586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088887.1 Klebsiella pneumoniae strain CHS192 genomic scaffold aetzn-supercont1.1, whole genome shotgun sequence (1967180 bp)
Overview 1 RT 1: 582075-585482 bp 2 RT 2: 1024606-1030211 bp 3 RT 3: 1367800-1373218 bp Neighborhood of RT #1 [582075, 585583] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024606, 1030237] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367800, 1373220] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 582075-582806 bp Feature: domain Description: Laminin_G_3 Location: 582396-582750 bp Feature: domain Description: Laminin_G_3 Location: 582 396-582 750 bp Feature: gene Location: 582803-583012 bp Feature: gene Location: 583462-584949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583867-584557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583867-584557 bp Feature: gene Location: 585027-585266 bp Feature: gene Location: 585266-585583 bp Feature: domain Description: PRK10276 Location: 585272-585386 bp Feature: domain Description: PRK102 76 Location: 5852 72 -585386 bp Feature: domain Description: PRK10276 Location: 585413-585482 bp Feature: domain Description: PRK102 76 Location: 585413-585482 bp Feature: gene Location: 1024606-1025169 bp Feature: domain Description: YbjK Location: 1024612-1025149 bp Feature: domain Description: YbjK Location: 102 4612 -102 5149 bp Feature: gene Location: 1025292-1026344 bp Feature: domain Description: int Location: 1025295-1026294 bp Feature: domain Description: int Location: 102 52 95-102 62 94 bp Feature: gene Location: 1026760-1028247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027165-1027855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 7165-102 7855 bp Feature: gene Location: 1028346-1029290 bp Feature: gene Location: 1029302-1030237 bp Feature: domain Description: Phage_CI_repr Location: 1029386-1029569 bp Feature: domain Description: Phage_CI_repr Location: 102 9386-102 9569 bp Feature: domain Description: Phage_CI_repr Location: 1029698-1029890 bp Feature: domain Description: Phage_CI_repr Location: 102 9698-102 9890 bp Feature: domain Description: Phage_CI_C Location: 1029917-1030211 bp Feature: domain Description: Phage_CI_C Location: 102 9917-10302 11 bp Feature: gene Location: 1367800-1368939 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367983-1368883 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367983-1368883 bp Feature: gene Location: 1369110-1369352 bp Feature: domain Description: DinI Location: 1369161-1369341 bp Feature: domain Description: DinI Location: 1369161-1369341 bp Feature: gene Location: 1369967-1371454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370372-1371062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370372 -1371062 bp Feature: gene Location: 1371533-1371952 bp Feature: domain Description: PRK10276 Location: 1371536-1371947 bp Feature: domain Description: PRK102 76 Location: 1371536-1371947 bp Feature: gene Location: 1371955-1373220 bp Feature: domain Description: umuC Location: 1371958-1373218 bp Feature: domain Description: umuC Location: 1371958-13732 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ088888.1 Klebsiella pneumoniae strain CHS192 genomic scaffold aetzn-supercont1.2, whole genome shotgun sequence (1457724 bp)
Overview 1 RT 1: 901459-909852 bp Neighborhood of RT #1 [901459, 909854] YccC PRK10016 RVT-GII RVT-GII dacD SbcB Feature: gene Location: 901459-902517 bp Feature: domain Description: YccC Location: 901465-902503 bp Feature: domain Description: YccC Location: 901465-902503 bp Feature: gene Location: 902616-903089 bp Feature: domain Description: PRK10016 Location: 902619-903078 bp Feature: domain Description: PRK10016 Location: 902619-903 078 bp Feature: gene Location: 903171-904658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903576-904266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903 576-904266 bp Feature: gene Location: 905081-906568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905486-906176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905486-906176 bp Feature: gene Location: 907086-908249 bp Feature: domain Description: dacD Location: 907089-908244 bp Feature: domain Description: dacD Location: 907089-908244 bp Feature: gene Location: 908430-909854 bp Feature: domain Description: SbcB Location: 908436-909852 bp Feature: domain Description: SbcB Location: 90843 6-909852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)