myRT

myRT report for GCA_001032705.1_Kleb_pneu_CHS197_V1

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Seq: KQ088919.1 Klebsiella pneumoniae strain CHS197 genomic scaffold aetgq-supercont1.2, whole genome shotgun sequence (1791895 bp)
Overview 1 RT 1: 771361-776966 bp 2 RT 2: 1115088-1121074 bp Neighborhood of RT #1 [771361, 776992] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1115088, 1121076] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 771361-771924 bp Feature: domain Description: YbjK Location: 771367-771904 bp Feature: domain Description: YbjK Location: 771 367-771 904 bp Feature: gene Location: 772047-773099 bp Feature: domain Description: int Location: 772050-773049 bp Feature: domain Description: int Location: 772050-773049 bp Feature: gene Location: 773515-775002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773920-774610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773920-77461 0 bp Feature: gene Location: 775101-776045 bp Feature: gene Location: 776057-776992 bp Feature: domain Description: Phage_CI_repr Location: 776141-776324 bp Feature: domain Description: Phage_CI_repr Location: 7761 41 -776324 bp Feature: domain Description: Phage_CI_repr Location: 776453-776645 bp Feature: domain Description: Phage_CI_repr Location: 776453-776645 bp Feature: domain Description: Phage_CI_C Location: 776672-776966 bp Feature: domain Description: Phage_CI_C Location: 776672-776966 bp Feature: gene Location: 1115088-1116227 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115271-1116171 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 5271 -1 1 1 61 71 bp Feature: gene Location: 1116398-1116640 bp Feature: domain Description: DinI Location: 1116449-1116629 bp Feature: domain Description: DinI Location: 1 1 1 6449-1 1 1 6629 bp Feature: gene Location: 1117823-1119310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118228-1118918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 8228-1 1 1 891 8 bp Feature: gene Location: 1119389-1119808 bp Feature: domain Description: PRK10276 Location: 1119392-1119803 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 9392-1 1 1 9803 bp Feature: gene Location: 1119811-1121076 bp Feature: domain Description: umuC Location: 1119814-1121074 bp Feature: domain Description: umuC Location: 1 1 1 981 4-1 1 21 074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088923.1 Klebsiella pneumoniae strain CHS197 genomic scaffold aetgq-supercont1.6, whole genome shotgun sequence (138533 bp)
Overview 1 RT 1: 80949-85943 bp Neighborhood of RT #1 [80949, 85945] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 80949-82220 bp Feature: domain Description: umuC Location: 80952-82215 bp Feature: domain Description: umuC Location: 80952 -82 2 15 bp Feature: gene Location: 82220-82645 bp Feature: domain Description: PRK10276 Location: 82223-82631 bp Feature: domain Description: PRK102 76 Location: 82 2 2 3-82 631 bp Feature: gene Location: 83048-84535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83453-84143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83453-84143 bp Feature: gene Location: 84769-84999 bp Feature: gene Location: 85520-85945 bp Feature: domain Description: Antirestrict Location: 85655-85943 bp Feature: domain Description: Antirestrict Location: 85655-85943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088918.1 Klebsiella pneumoniae strain CHS197 genomic scaffold aetgq-supercont1.1, whole genome shotgun sequence (2794788 bp)
Overview 1 RT 1: 887628-894111 bp Neighborhood of RT #1 [887628, 894113] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887628-888686 bp Feature: domain Description: YccC Location: 887634-888672 bp Feature: domain Description: YccC Location: 88763 4-888672 bp Feature: gene Location: 888785-889258 bp Feature: domain Description: PRK10016 Location: 888788-889247 bp Feature: domain Description: PRK10016 Location: 888788-889247 bp Feature: gene Location: 889340-890827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889745-890435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889745-89043 5 bp Feature: gene Location: 891345-892508 bp Feature: domain Description: dacD Location: 891348-892503 bp Feature: domain Description: dacD Location: 8913 48-892503 bp Feature: gene Location: 892689-894113 bp Feature: domain Description: SbcB Location: 892695-894111 bp Feature: domain Description: SbcB Location: 892695-894111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)