myRT

myRT report for GCA_001032765.1_Kleb_pneu_CHS200_V1

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Seq: KQ088942.1 Klebsiella pneumoniae strain CHS200 genomic scaffold aetyw-supercont1.1, whole genome shotgun sequence (3372914 bp)
Overview 1 RT 1: 883717-890200 bp Neighborhood of RT #1 [883717, 890202] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883717-884775 bp Feature: domain Description: YccC Location: 883723-884761 bp Feature: domain Description: YccC Location: 883723-884761 bp Feature: gene Location: 884874-885347 bp Feature: domain Description: PRK10016 Location: 884877-885336 bp Feature: domain Description: PRK1 001 6 Location: 884877-885336 bp Feature: gene Location: 885429-886916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885834-886524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885834-886524 bp Feature: gene Location: 887434-888597 bp Feature: domain Description: dacD Location: 887437-888592 bp Feature: domain Description: dacD Location: 887437-888592 bp Feature: gene Location: 888778-890202 bp Feature: domain Description: SbcB Location: 888784-890200 bp Feature: domain Description: SbcB Location: 888784-890200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088943.1 Klebsiella pneumoniae strain CHS200 genomic scaffold aetyw-supercont1.2, whole genome shotgun sequence (1512983 bp)
Overview 1 RT 1: 581470-584877 bp 2 RT 2: 1024265-1029870 bp 3 RT 3: 1367633-1373051 bp Neighborhood of RT #1 [581470, 584978] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024265, 1029896] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367633, 1373053] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 581470-582201 bp Feature: domain Description: Laminin_G_3 Location: 581791-582145 bp Feature: domain Description: Laminin_G_3 Location: 581791-582 145 bp Feature: gene Location: 582198-582407 bp Feature: gene Location: 582857-584344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583262-583952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5832 62 -583952 bp Feature: gene Location: 584422-584661 bp Feature: gene Location: 584661-584978 bp Feature: domain Description: PRK10276 Location: 584667-584781 bp Feature: domain Description: PRK102 76 Location: 584667-584781 bp Feature: domain Description: PRK10276 Location: 584808-584877 bp Feature: domain Description: PRK102 76 Location: 584808-584877 bp Feature: gene Location: 1024265-1024828 bp Feature: domain Description: YbjK Location: 1024271-1024808 bp Feature: domain Description: YbjK Location: 102 42 71-102 4808 bp Feature: gene Location: 1024951-1026003 bp Feature: domain Description: int Location: 1024954-1025953 bp Feature: domain Description: int Location: 102 4954-102 5953 bp Feature: gene Location: 1026419-1027906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026824-1027514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 682 4-102 7514 bp Feature: gene Location: 1028005-1028949 bp Feature: gene Location: 1028961-1029896 bp Feature: domain Description: Phage_CI_repr Location: 1029045-1029228 bp Feature: domain Description: Phage_CI_repr Location: 102 9045-102 92 2 8 bp Feature: domain Description: Phage_CI_repr Location: 1029357-1029549 bp Feature: domain Description: Phage_CI_repr Location: 102 9357-102 9549 bp Feature: domain Description: Phage_CI_C Location: 1029576-1029870 bp Feature: domain Description: Phage_CI_C Location: 102 9576-102 9870 bp Feature: gene Location: 1367633-1368772 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367816-1368716 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367816-1368716 bp Feature: gene Location: 1368943-1369185 bp Feature: domain Description: DinI Location: 1368994-1369174 bp Feature: domain Description: DinI Location: 1368994-1369174 bp Feature: gene Location: 1369800-1371287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370205-1370895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13702 05-1370895 bp Feature: gene Location: 1371366-1371785 bp Feature: domain Description: PRK10276 Location: 1371369-1371780 bp Feature: domain Description: PRK102 76 Location: 1371369-1371780 bp Feature: gene Location: 1371788-1373053 bp Feature: domain Description: umuC Location: 1371791-1373051 bp Feature: domain Description: umuC Location: 1371791-1373051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ088946.1 Klebsiella pneumoniae strain CHS200 genomic scaffold aetyw-supercont1.5, whole genome shotgun sequence (139008 bp)
Overview 1 RT 1: 81424-86418 bp Neighborhood of RT #1 [81424, 86420] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 81424-82695 bp Feature: domain Description: umuC Location: 81427-82690 bp Feature: domain Description: umuC Location: 81427-82690 bp Feature: gene Location: 82695-83120 bp Feature: domain Description: PRK10276 Location: 82698-83106 bp Feature: domain Description: PRK10276 Location: 82698-83 106 bp Feature: gene Location: 83523-85010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83928-84618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 928-84618 bp Feature: gene Location: 85244-85474 bp Feature: gene Location: 85995-86420 bp Feature: domain Description: Antirestrict Location: 86130-86418 bp Feature: domain Description: Antirestrict Location: 8613 0-86418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088944.1 Klebsiella pneumoniae strain CHS200 genomic scaffold aetyw-supercont1.3, whole genome shotgun sequence (501380 bp)
Overview 1 RT 1: 15065-20366 bp Neighborhood of RT #1 [15065, 20368] PinE RVT-GII PRK10276 umuC Feature: gene Location: 15065-15205 bp Feature: gene Location: 15271-15720 bp Feature: domain Description: PinE Location: 15280-15712 bp Feature: domain Description: PinE Location: 15280-15712 bp Feature: gene Location: 17115-18602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17520-18210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17520-18210 bp Feature: gene Location: 18595-19101 bp Feature: domain Description: PRK10276 Location: 18685-19096 bp Feature: domain Description: PRK10276 Location: 18685-19096 bp Feature: gene Location: 19103-20368 bp Feature: domain Description: umuC Location: 19106-20366 bp Feature: domain Description: umuC Location: 19106-20366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)