myRT

myRT report for GCA_001032795.1_Kleb_pneu_CHS202_V1

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Seq: KQ088961.1 Klebsiella pneumoniae strain CHS202 genomic scaffold aetzy-supercont1.3, whole genome shotgun sequence (587628 bp)
Overview 1 RT 1: 14757-19852 bp Neighborhood of RT #1 [14757, 19854] PinE RVT-GII PRK10276 umuC Feature: gene Location: 14757-15206 bp Feature: domain Description: PinE Location: 14766-15198 bp Feature: domain Description: PinE Location: 1 4766-1 51 98 bp Feature: gene Location: 16601-18088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17006-17696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7006-1 7696 bp Feature: gene Location: 18081-18587 bp Feature: domain Description: PRK10276 Location: 18171-18582 bp Feature: domain Description: PRK1 0276 Location: 1 81 71 -1 8582 bp Feature: gene Location: 18589-19854 bp Feature: domain Description: umuC Location: 18592-19852 bp Feature: domain Description: umuC Location: 1 8592-1 9852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088959.1 Klebsiella pneumoniae strain CHS202 genomic scaffold aetzy-supercont1.1, whole genome shotgun sequence (3533238 bp)
Overview 1 RT 1: 884246-890729 bp 2 RT 2: 1094662-1104647 bp Neighborhood of RT #1 [884246, 890731] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1094662, 1104652] PRK10554 PRK10618 RVT-GII PRK10840 PRK10841 Feature: gene Location: 884246-885304 bp Feature: domain Description: YccC Location: 884252-885290 bp Feature: domain Description: YccC Location: 8842 52 -8852 90 bp Feature: gene Location: 885403-885876 bp Feature: domain Description: PRK10016 Location: 885406-885865 bp Feature: domain Description: PRK10016 Location: 885406-885865 bp Feature: gene Location: 885958-887445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886363-887053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886363-887053 bp Feature: gene Location: 887963-889126 bp Feature: domain Description: dacD Location: 887966-889121 bp Feature: domain Description: dacD Location: 887966-88912 1 bp Feature: gene Location: 889307-890731 bp Feature: domain Description: SbcB Location: 889313-890729 bp Feature: domain Description: SbcB Location: 889313-89072 9 bp Feature: gene Location: 1094662-1095765 bp Feature: domain Description: PRK10554 Location: 1094704-1095763 bp Feature: domain Description: PRK10554 Location: 1094704-1095763 bp Feature: gene Location: 1096536-1099193 bp Feature: domain Description: PRK10618 Location: 1096545-1099191 bp Feature: domain Description: PRK10618 Location: 1096545-1099191 bp Feature: gene Location: 1099311-1100798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099716-1100406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099716-1100406 bp Feature: gene Location: 1101203-1101769 bp Feature: domain Description: PRK10840 Location: 1101206-1101767 bp Feature: domain Description: PRK10840 Location: 11012 06-1101767 bp Feature: gene Location: 1101815-1104652 bp Feature: domain Description: PRK10841 Location: 1101887-1104647 bp Feature: domain Description: PRK10841 Location: 1101887-1104647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), PRK10554 (outer membrane porin protein C; Provisional), PRK10618 (phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional), PRK10840 (transcriptional regulator RcsB; Provisional), PRK10841 (two-component system sensor histidine kinase RcsC)

Seq: KQ088960.1 Klebsiella pneumoniae strain CHS202 genomic scaffold aetzy-supercont1.2, whole genome shotgun sequence (1514630 bp)
Overview 1 RT 1: 583369-586776 bp 2 RT 2: 1026011-1031616 bp 3 RT 3: 1369280-1374698 bp Neighborhood of RT #1 [583369, 586877] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026011, 1031642] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369280, 1374700] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 583369-584100 bp Feature: domain Description: Laminin_G_3 Location: 583690-584044 bp Feature: domain Description: Laminin_G_3 Location: 583 690-584044 bp Feature: gene Location: 584097-584306 bp Feature: gene Location: 584756-586243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585161-585851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585161-585851 bp Feature: gene Location: 586321-586560 bp Feature: gene Location: 586560-586877 bp Feature: domain Description: PRK10276 Location: 586566-586680 bp Feature: domain Description: PRK10276 Location: 586566-586680 bp Feature: domain Description: PRK10276 Location: 586707-586776 bp Feature: domain Description: PRK10276 Location: 586707-586776 bp Feature: gene Location: 1026011-1026574 bp Feature: domain Description: YbjK Location: 1026017-1026554 bp Feature: domain Description: YbjK Location: 1026017-1026554 bp Feature: gene Location: 1026697-1027749 bp Feature: domain Description: int Location: 1026700-1027699 bp Feature: domain Description: int Location: 1026700-1027699 bp Feature: gene Location: 1028165-1029652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028570-1029260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028570-1029260 bp Feature: gene Location: 1029751-1030695 bp Feature: gene Location: 1030707-1031642 bp Feature: domain Description: Phage_CI_repr Location: 1030791-1030974 bp Feature: domain Description: Phage_CI_repr Location: 103 0791-103 0974 bp Feature: domain Description: Phage_CI_repr Location: 1031103-1031295 bp Feature: domain Description: Phage_CI_repr Location: 103 1103 -103 1295 bp Feature: domain Description: Phage_CI_C Location: 1031322-1031616 bp Feature: domain Description: Phage_CI_C Location: 103 13 22-103 1616 bp Feature: gene Location: 1369280-1370419 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369463-1370363 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 69463 -13 703 63 bp Feature: gene Location: 1370590-1370832 bp Feature: domain Description: DinI Location: 1370641-1370821 bp Feature: domain Description: DinI Location: 13 70641-13 70821 bp Feature: gene Location: 1371447-1372934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371852-1372542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 71852-13 72542 bp Feature: gene Location: 1373013-1373432 bp Feature: domain Description: PRK10276 Location: 1373016-1373427 bp Feature: domain Description: PRK10276 Location: 13 73 016-13 73 427 bp Feature: gene Location: 1373435-1374700 bp Feature: domain Description: umuC Location: 1373438-1374698 bp Feature: domain Description: umuC Location: 13 73 43 8-13 74698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ088962.1 Klebsiella pneumoniae strain CHS202 genomic scaffold aetzy-supercont1.4, whole genome shotgun sequence (154464 bp)
Overview 1 RT 1: 96879-101873 bp Neighborhood of RT #1 [96879, 101875] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 96879-98150 bp Feature: domain Description: umuC Location: 96882-98145 bp Feature: domain Description: umuC Location: 96882-9814 5 bp Feature: gene Location: 98150-98575 bp Feature: domain Description: PRK10276 Location: 98153-98561 bp Feature: domain Description: PRK10276 Location: 98153-98561 bp Feature: gene Location: 98978-100465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99383-100073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99383-100073 bp Feature: gene Location: 100699-100929 bp Feature: gene Location: 101450-101875 bp Feature: domain Description: Antirestrict Location: 101585-101873 bp Feature: domain Description: Antirestrict Location: 101585-101873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII