myRT

myRT report for GCA_001032815.1_Kleb_pneu_CHS205_V1

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Seq: KQ088966.1 Klebsiella pneumoniae strain CHS205 genomic scaffold aetgr-supercont1.2, whole genome shotgun sequence (1250932 bp)
Overview 1 RT 1: 696620-703103 bp 2 RT 2: 1147477-1150958 bp Neighborhood of RT #1 [696620, 703105] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1147477, 1150958] Terminase_2 RVT-GII Feature: gene Location: 696620-697678 bp Feature: domain Description: YccC Location: 696626-697664 bp Feature: domain Description: YccC Location: 696626-697664 bp Feature: gene Location: 697777-698250 bp Feature: domain Description: PRK10016 Location: 697780-698239 bp Feature: domain Description: PRK1 001 6 Location: 697780-698239 bp Feature: gene Location: 698332-699819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698737-699427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698737-699427 bp Feature: gene Location: 700337-701500 bp Feature: domain Description: dacD Location: 700340-701495 bp Feature: domain Description: dacD Location: 700340-701 495 bp Feature: gene Location: 701681-703105 bp Feature: domain Description: SbcB Location: 701687-703103 bp Feature: domain Description: SbcB Location: 701 687-7031 03 bp Feature: gene Location: 1147477-1148061 bp Feature: domain Description: Terminase_2 Location: 1147522-1147987 bp Feature: domain Description: Terminase_2 Location: 1 1 47522-1 1 47987 bp Feature: gene Location: 1148139-1148396 bp Feature: gene Location: 1148797-1150284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1149202-1149892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 49202-1 1 49892 bp Feature: gene Location: 1150381-1150719 bp Feature: gene Location: 1150719-1150958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)

Seq: KQ088965.1 Klebsiella pneumoniae strain CHS205 genomic scaffold aetgr-supercont1.1, whole genome shotgun sequence (3248244 bp)
Overview 1 RT 1: 1883479-1886886 bp 2 RT 2: 2280432-2286037 bp 3 RT 3: 2624774-2630192 bp 4 RT 4: 2807684-2812981 bp Neighborhood of RT #1 [1883479, 1886987] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [2280432, 2286063] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2624774, 2630194] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2807684, 2812983] PinE RVT-GII PRK10276 umuC Feature: gene Location: 1883479-1884210 bp Feature: domain Description: Laminin_G_3 Location: 1883800-1884154 bp Feature: domain Description: Laminin_G_3 Location: 1883800-1884154 bp Feature: gene Location: 1884207-1884416 bp Feature: gene Location: 1884866-1886353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1885271-1885961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18852 71-1885961 bp Feature: gene Location: 1886431-1886670 bp Feature: gene Location: 1886670-1886987 bp Feature: domain Description: PRK10276 Location: 1886676-1886790 bp Feature: domain Description: PRK102 76 Location: 1886676-1886790 bp Feature: domain Description: PRK10276 Location: 1886817-1886886 bp Feature: domain Description: PRK102 76 Location: 1886817-1886886 bp Feature: gene Location: 2280432-2280995 bp Feature: domain Description: YbjK Location: 2280438-2280975 bp Feature: domain Description: YbjK Location: 2 2 80438-2 2 80975 bp Feature: gene Location: 2281118-2282170 bp Feature: domain Description: int Location: 2281121-2282120 bp Feature: domain Description: int Location: 2 2 8112 1-2 2 82 12 0 bp Feature: gene Location: 2282586-2284073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2282991-2283681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 82 991-2 2 83681 bp Feature: gene Location: 2284172-2285116 bp Feature: gene Location: 2285128-2286063 bp Feature: domain Description: Phage_CI_repr Location: 2285212-2285395 bp Feature: domain Description: Phage_CI_repr Location: 2 2 852 12 -2 2 85395 bp Feature: domain Description: Phage_CI_repr Location: 2285524-2285716 bp Feature: domain Description: Phage_CI_repr Location: 2 2 8552 4-2 2 85716 bp Feature: domain Description: Phage_CI_C Location: 2285743-2286037 bp Feature: domain Description: Phage_CI_C Location: 2 2 85743-2 2 86037 bp Feature: gene Location: 2624774-2625913 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2624957-2625857 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 62 4957-2 62 5857 bp Feature: gene Location: 2626084-2626326 bp Feature: domain Description: DinI Location: 2626135-2626315 bp Feature: domain Description: DinI Location: 2 62 6135-2 62 6315 bp Feature: gene Location: 2626941-2628428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2627346-2628036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 7346-2 62 8036 bp Feature: gene Location: 2628507-2628926 bp Feature: domain Description: PRK10276 Location: 2628510-2628921 bp Feature: domain Description: PRK102 76 Location: 2 62 8510-2 62 892 1 bp Feature: gene Location: 2628929-2630194 bp Feature: domain Description: umuC Location: 2628932-2630192 bp Feature: domain Description: umuC Location: 2 62 8932 -2 630192 bp Feature: gene Location: 2807684-2807820 bp Feature: gene Location: 2807886-2808335 bp Feature: domain Description: PinE Location: 2807895-2808327 bp Feature: domain Description: PinE Location: 2 807895-2 80832 7 bp Feature: gene Location: 2809730-2811217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2810135-2810825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 810135-2 81082 5 bp Feature: gene Location: 2811210-2811716 bp Feature: domain Description: PRK10276 Location: 2811300-2811711 bp Feature: domain Description: PRK102 76 Location: 2 811300-2 811711 bp Feature: gene Location: 2811718-2812983 bp Feature: domain Description: umuC Location: 2811721-2812981 bp Feature: domain Description: umuC Location: 2 81172 1-2 812 981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)