myRT

myRT report for GCA_001032845.1_Kleb_pneu_CHS206_V1

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Seq: KQ088979.1 Klebsiella pneumoniae strain CHS206 genomic scaffold aeurj-supercont1.7, whole genome shotgun sequence (77982 bp)
Overview 1 RT 1: 70545-74948 bp Neighborhood of RT #1 [70545, 74948] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 70545-70868 bp Feature: gene Location: 70928-72148 bp Feature: domain Description: zf-ISL3 Location: 71060-71186 bp Feature: domain Description: zf-ISL3 Location: 71 060-71 1 86 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 71204-71351 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 71 204-71 351 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 71402-72107 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 71 402-721 07 bp Feature: gene Location: 72595-74079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72997-73687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72997-73687 bp Feature: gene Location: 74170-74418 bp Feature: gene Location: 74598-74948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII

Seq: KQ088974.1 Klebsiella pneumoniae strain CHS206 genomic scaffold aeurj-supercont1.2, whole genome shotgun sequence (401101 bp)
Overview 1 RT 1: 353735-361233 bp Neighborhood of RT #1 [353735, 363338] CbtA_toxin DUF4942 RVT-Retrons PRK09358 PRK09358 pfam13191 Feature: gene Location: 353735-354076 bp Feature: domain Description: CbtA_toxin Location: 353738-354056 bp Feature: domain Description: CbtA_toxin Location: 353738-354056 bp Feature: gene Location: 354140-355024 bp Feature: domain Description: DUF4942 Location: 354443-355004 bp Feature: domain Description: DUF4942 Location: 354443-355004 bp Feature: gene Location: 355651-357375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 355789-356416 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 355789-356416 bp Feature: gene Location: 358054-360453 bp Feature: domain Description: PRK09358 Location: 359437-359656 bp Feature: domain Description: PRK09358 Location: 359437-359656 bp Feature: domain Description: PRK09358 Location: 360121-360349 bp Feature: domain Description: PRK09358 Location: 36012 1-360349 bp Feature: gene Location: 360486-363338 bp Feature: domain Description: pfam13191 Location: 360690-361233 bp Feature: domain Description: pfam13191 Location: 360690-3612 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbtA_toxin (pfam06755), DUF4942 (pfam13708), RVT-Retrons, PRK09358 (adenosine deaminase; Provisional), pfam13191 (AAA_16;AAA ATPase domain)

Seq: KQ088976.1 Klebsiella pneumoniae strain CHS206 genomic scaffold aeurj-supercont1.4, whole genome shotgun sequence (223499 bp)
Overview 1 RT 1: 33817-38611 bp Neighborhood of RT #1 [33817, 38613] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 33817-34866 bp Feature: domain Description: umuC Location: 33820-34816 bp Feature: domain Description: umuC Location: 3 3 820-3 4816 bp Feature: gene Location: 34866-35291 bp Feature: domain Description: PRK10276 Location: 34869-35277 bp Feature: domain Description: PRK10276 Location: 3 4869-3 5277 bp Feature: gene Location: 35771-37204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36098-36812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6098-3 6812 bp Feature: gene Location: 37438-37668 bp Feature: gene Location: 38188-38613 bp Feature: domain Description: Antirestrict Location: 38323-38611 bp Feature: domain Description: Antirestrict Location: 3 83 23 -3 8611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)