myRT

myRT report for GCA_001032855.1_Kleb_pneu_CHS207_V1

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Seq: KQ088984.1 Klebsiella pneumoniae strain CHS207 genomic scaffold aetzh-supercont1.1, whole genome shotgun sequence (3369896 bp)
Overview 1 RT 1: 750789-757272 bp Neighborhood of RT #1 [750789, 757274] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 750789-751847 bp Feature: domain Description: YccC Location: 750795-751833 bp Feature: domain Description: YccC Location: 750795-751 833 bp Feature: gene Location: 751946-752419 bp Feature: domain Description: PRK10016 Location: 751949-752408 bp Feature: domain Description: PRK1 001 6 Location: 751 949-752408 bp Feature: gene Location: 752501-753985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752903-753593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752903-753593 bp Feature: gene Location: 754506-755669 bp Feature: domain Description: dacD Location: 754509-755664 bp Feature: domain Description: dacD Location: 754509-755664 bp Feature: gene Location: 755850-757274 bp Feature: domain Description: SbcB Location: 755856-757272 bp Feature: domain Description: SbcB Location: 755856-757272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088985.1 Klebsiella pneumoniae strain CHS207 genomic scaffold aetzh-supercont1.2, whole genome shotgun sequence (2043778 bp)
Overview 1 RT 1: 585077-588484 bp 2 RT 2: 1027748-1033353 bp 3 RT 3: 1371973-1377391 bp 4 RT 4: 1557180-1562499 bp Neighborhood of RT #1 [585077, 588585] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027748, 1033379] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371973, 1377393] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1557180, 1562501] PinE RVT-GII PRK10276 umuC Feature: gene Location: 585077-585808 bp Feature: domain Description: Laminin_G_3 Location: 585398-585752 bp Feature: domain Description: Laminin_G_3 Location: 585398-585752 bp Feature: gene Location: 585805-586014 bp Feature: gene Location: 586467-587951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586869-587559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586869-587559 bp Feature: gene Location: 588029-588268 bp Feature: gene Location: 588268-588585 bp Feature: domain Description: PRK10276 Location: 588274-588388 bp Feature: domain Description: PRK102 76 Location: 5882 74-588388 bp Feature: domain Description: PRK10276 Location: 588415-588484 bp Feature: domain Description: PRK102 76 Location: 588415-588484 bp Feature: gene Location: 1027748-1028311 bp Feature: domain Description: YbjK Location: 1027754-1028291 bp Feature: domain Description: YbjK Location: 102 7754-102 82 91 bp Feature: gene Location: 1028434-1029486 bp Feature: domain Description: int Location: 1028437-1029436 bp Feature: domain Description: int Location: 102 8437-102 9436 bp Feature: gene Location: 1029905-1031389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030307-1030997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030307-1030997 bp Feature: gene Location: 1031488-1032432 bp Feature: gene Location: 1032444-1033379 bp Feature: domain Description: Phage_CI_repr Location: 1032528-1032711 bp Feature: domain Description: Phage_CI_repr Location: 1032 52 8-1032 711 bp Feature: domain Description: Phage_CI_repr Location: 1032840-1033032 bp Feature: domain Description: Phage_CI_repr Location: 1032 840-1033032 bp Feature: domain Description: Phage_CI_C Location: 1033059-1033353 bp Feature: domain Description: Phage_CI_C Location: 1033059-1033353 bp Feature: gene Location: 1371973-1373112 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372156-1373056 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372 156-1373056 bp Feature: gene Location: 1373283-1373525 bp Feature: domain Description: DinI Location: 1373334-1373514 bp Feature: domain Description: DinI Location: 1373334-1373514 bp Feature: gene Location: 1374143-1375627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374545-1375235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374545-13752 35 bp Feature: gene Location: 1375706-1376125 bp Feature: domain Description: PRK10276 Location: 1375709-1376120 bp Feature: domain Description: PRK102 76 Location: 1375709-137612 0 bp Feature: gene Location: 1376128-1377393 bp Feature: domain Description: umuC Location: 1376131-1377391 bp Feature: domain Description: umuC Location: 1376131-1377391 bp Feature: gene Location: 1557180-1557338 bp Feature: gene Location: 1557404-1557853 bp Feature: domain Description: PinE Location: 1557413-1557845 bp Feature: domain Description: PinE Location: 1557413-1557845 bp Feature: gene Location: 1559251-1560735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559653-1560343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559653-1560343 bp Feature: gene Location: 1560728-1561234 bp Feature: domain Description: PRK10276 Location: 1560818-1561229 bp Feature: domain Description: PRK102 76 Location: 1560818-15612 2 9 bp Feature: gene Location: 1561236-1562501 bp Feature: domain Description: umuC Location: 1561239-1562499 bp Feature: domain Description: umuC Location: 15612 39-1562 499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ088986.1 Klebsiella pneumoniae strain CHS207 genomic scaffold aetzh-supercont1.3, whole genome shotgun sequence (152435 bp)
Overview 1 RT 1: 94851-99845 bp Neighborhood of RT #1 [94851, 99847] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 94851-96122 bp Feature: domain Description: umuC Location: 94854-96117 bp Feature: domain Description: umuC Location: 94854-96117 bp Feature: gene Location: 96122-96547 bp Feature: domain Description: PRK10276 Location: 96125-96533 bp Feature: domain Description: PRK10276 Location: 96125-9653 3 bp Feature: gene Location: 96953-98437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97355-98045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973 55-98045 bp Feature: gene Location: 98671-98901 bp Feature: gene Location: 99422-99847 bp Feature: domain Description: Antirestrict Location: 99557-99845 bp Feature: domain Description: Antirestrict Location: 99557-99845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)