myRT

myRT report for GCA_001032895.1_Kleb_pneu_CHS209_V1

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Seq: KQ089003.1 Klebsiella pneumoniae strain CHS209 genomic scaffold aetyx-supercont1.4, whole genome shotgun sequence (494089 bp)
Overview 1 RT 1: 5125-10990 bp Neighborhood of RT #1 [5125, 10992] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 5125-5829 bp Feature: domain Description: Rve Location: 5128-5773 bp Feature: domain Description: Rve Location: 51 28-5773 bp Feature: gene Location: 5895-6344 bp Feature: domain Description: PinE Location: 5904-6336 bp Feature: domain Description: PinE Location: 5904-6336 bp Feature: gene Location: 7739-9226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8144-8834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 44-8834 bp Feature: gene Location: 9219-9725 bp Feature: domain Description: PRK10276 Location: 9309-9720 bp Feature: domain Description: PRK1 0276 Location: 9309-9720 bp Feature: gene Location: 9727-10992 bp Feature: domain Description: umuC Location: 9730-10990 bp Feature: domain Description: umuC Location: 9730-1 0990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ089004.1 Klebsiella pneumoniae strain CHS209 genomic scaffold aetyx-supercont1.5, whole genome shotgun sequence (174924 bp)
Overview 1 RT 1: 117340-122334 bp Neighborhood of RT #1 [117340, 122336] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117340-118611 bp Feature: domain Description: umuC Location: 117343-118606 bp Feature: domain Description: umuC Location: 117343-118606 bp Feature: gene Location: 118611-119036 bp Feature: domain Description: PRK10276 Location: 118614-119022 bp Feature: domain Description: PRK102 76 Location: 118614-11902 2 bp Feature: gene Location: 119439-120926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119844-120534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119844-12 0534 bp Feature: gene Location: 121160-121390 bp Feature: gene Location: 121911-122336 bp Feature: domain Description: Antirestrict Location: 122046-122334 bp Feature: domain Description: Antirestrict Location: 12 2 046-12 2 334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089001.1 Klebsiella pneumoniae strain CHS209 genomic scaffold aetyx-supercont1.2, whole genome shotgun sequence (1556252 bp)
Overview 1 RT 1: 587989-591396 bp 2 RT 2: 1030520-1036125 bp 3 RT 3: 1374496-1379914 bp Neighborhood of RT #1 [587989, 591497] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030520, 1036151] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1374496, 1379916] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 587989-588720 bp Feature: domain Description: Laminin_G_3 Location: 588310-588664 bp Feature: domain Description: Laminin_G_3 Location: 5883 10-588664 bp Feature: gene Location: 588717-588926 bp Feature: gene Location: 589376-590863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589781-590471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589781-590471 bp Feature: gene Location: 590941-591180 bp Feature: gene Location: 591180-591497 bp Feature: domain Description: PRK10276 Location: 591186-591300 bp Feature: domain Description: PRK10276 Location: 591186-5913 00 bp Feature: domain Description: PRK10276 Location: 591327-591396 bp Feature: domain Description: PRK10276 Location: 5913 27-5913 96 bp Feature: gene Location: 1030520-1031083 bp Feature: domain Description: YbjK Location: 1030526-1031063 bp Feature: domain Description: YbjK Location: 103 0526-103 1063 bp Feature: gene Location: 1031206-1032258 bp Feature: domain Description: int Location: 1031209-1032208 bp Feature: domain Description: int Location: 103 1209-103 2208 bp Feature: gene Location: 1032674-1034161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1033079-1033769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 3 079-103 3 769 bp Feature: gene Location: 1034260-1035204 bp Feature: gene Location: 1035216-1036151 bp Feature: domain Description: Phage_CI_repr Location: 1035300-1035483 bp Feature: domain Description: Phage_CI_repr Location: 103 53 00-103 5483 bp Feature: domain Description: Phage_CI_repr Location: 1035612-1035804 bp Feature: domain Description: Phage_CI_repr Location: 103 5612-103 5804 bp Feature: domain Description: Phage_CI_C Location: 1035831-1036125 bp Feature: domain Description: Phage_CI_C Location: 103 583 1-103 6125 bp Feature: gene Location: 1374496-1375635 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1374679-1375579 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 74679-13 75579 bp Feature: gene Location: 1375806-1376048 bp Feature: domain Description: DinI Location: 1375857-1376037 bp Feature: domain Description: DinI Location: 13 75857-13 7603 7 bp Feature: gene Location: 1376663-1378150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377068-1377758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 77068-13 77758 bp Feature: gene Location: 1378229-1378648 bp Feature: domain Description: PRK10276 Location: 1378232-1378643 bp Feature: domain Description: PRK10276 Location: 13 7823 2-13 78643 bp Feature: gene Location: 1378651-1379916 bp Feature: domain Description: umuC Location: 1378654-1379914 bp Feature: domain Description: umuC Location: 13 78654-13 79914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ089000.1 Klebsiella pneumoniae strain CHS209 genomic scaffold aetyx-supercont1.1, whole genome shotgun sequence (2794509 bp)
Overview 1 RT 1: 886535-893018 bp Neighborhood of RT #1 [886535, 893020] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886535-887593 bp Feature: domain Description: YccC Location: 886541-887579 bp Feature: domain Description: YccC Location: 88654 1-887579 bp Feature: gene Location: 887692-888165 bp Feature: domain Description: PRK10016 Location: 887695-888154 bp Feature: domain Description: PRK10016 Location: 887695-888154 bp Feature: gene Location: 888247-889734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888652-889342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888652-88934 2 bp Feature: gene Location: 890252-891415 bp Feature: domain Description: dacD Location: 890255-891410 bp Feature: domain Description: dacD Location: 890255-8914 10 bp Feature: gene Location: 891596-893020 bp Feature: domain Description: SbcB Location: 891602-893018 bp Feature: domain Description: SbcB Location: 891602-893018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)