myRT

myRT report for GCA_001032925.1_Kleb_pneu_CHS210_V1

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Seq: KQ089016.1 Klebsiella pneumoniae strain CHS210 genomic scaffold aetAp-supercont1.3, whole genome shotgun sequence (139976 bp)
Overview 1 RT 1: 82392-87386 bp Neighborhood of RT #1 [82392, 87388] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82392-83663 bp Feature: domain Description: umuC Location: 82395-83658 bp Feature: domain Description: umuC Location: 82395-83658 bp Feature: gene Location: 83663-84088 bp Feature: domain Description: PRK10276 Location: 83666-84074 bp Feature: domain Description: PRK1 0276 Location: 83666-84074 bp Feature: gene Location: 84491-85978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84896-85586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84896-85586 bp Feature: gene Location: 86212-86442 bp Feature: gene Location: 86963-87388 bp Feature: domain Description: Antirestrict Location: 87098-87386 bp Feature: domain Description: Antirestrict Location: 87098-87386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089014.1 Klebsiella pneumoniae strain CHS210 genomic scaffold aetAp-supercont1.1, whole genome shotgun sequence (5080687 bp)
Overview 1 RT 1: 582568-585975 bp 2 RT 2: 1026298-1031903 bp 3 RT 3: 1369622-1375040 bp 4 RT 4: 1555045-1560352 bp 5 RT 5: 2923955-2930438 bp Neighborhood of RT #1 [582568, 586076] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026298, 1031929] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369622, 1375042] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555045, 1560354] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2923955, 2930440] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582568-583299 bp Feature: domain Description: Laminin_G_3 Location: 582889-583243 bp Feature: domain Description: Laminin_G_3 Location: 582 889-5832 43 bp Feature: gene Location: 583296-583505 bp Feature: gene Location: 583955-585442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584360-585050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584360-585050 bp Feature: gene Location: 585520-585759 bp Feature: gene Location: 585759-586076 bp Feature: domain Description: PRK10276 Location: 585765-585879 bp Feature: domain Description: PRK102 76 Location: 585765-585879 bp Feature: domain Description: PRK10276 Location: 585906-585975 bp Feature: domain Description: PRK102 76 Location: 585906-585975 bp Feature: gene Location: 1026298-1026861 bp Feature: domain Description: YbjK Location: 1026304-1026841 bp Feature: domain Description: YbjK Location: 102 6304-102 6841 bp Feature: gene Location: 1026984-1028036 bp Feature: domain Description: int Location: 1026987-1027986 bp Feature: domain Description: int Location: 102 6987-102 7986 bp Feature: gene Location: 1028452-1029939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028857-1029547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8857-102 9547 bp Feature: gene Location: 1030038-1030982 bp Feature: gene Location: 1030994-1031929 bp Feature: domain Description: Phage_CI_repr Location: 1031078-1031261 bp Feature: domain Description: Phage_CI_repr Location: 1031078-10312 61 bp Feature: domain Description: Phage_CI_repr Location: 1031390-1031582 bp Feature: domain Description: Phage_CI_repr Location: 1031390-1031582 bp Feature: domain Description: Phage_CI_C Location: 1031609-1031903 bp Feature: domain Description: Phage_CI_C Location: 1031609-1031903 bp Feature: gene Location: 1369622-1370761 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369805-1370705 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369805-1370705 bp Feature: gene Location: 1370932-1371174 bp Feature: domain Description: DinI Location: 1370983-1371163 bp Feature: domain Description: DinI Location: 1370983-1371163 bp Feature: gene Location: 1371789-1373276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372194-1372884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 194-1372 884 bp Feature: gene Location: 1373355-1373774 bp Feature: domain Description: PRK10276 Location: 1373358-1373769 bp Feature: domain Description: PRK102 76 Location: 1373358-1373769 bp Feature: gene Location: 1373777-1375042 bp Feature: domain Description: umuC Location: 1373780-1375040 bp Feature: domain Description: umuC Location: 1373780-1375040 bp Feature: gene Location: 1555045-1555191 bp Feature: gene Location: 1555257-1555706 bp Feature: domain Description: PinE Location: 1555266-1555698 bp Feature: domain Description: PinE Location: 15552 66-1555698 bp Feature: gene Location: 1557101-1558588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557506-1558196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557506-1558196 bp Feature: gene Location: 1558581-1559087 bp Feature: domain Description: PRK10276 Location: 1558671-1559082 bp Feature: domain Description: PRK102 76 Location: 1558671-1559082 bp Feature: gene Location: 1559089-1560354 bp Feature: domain Description: umuC Location: 1559092-1560352 bp Feature: domain Description: umuC Location: 1559092 -1560352 bp Feature: gene Location: 2923955-2925013 bp Feature: domain Description: YccC Location: 2923961-2924999 bp Feature: domain Description: YccC Location: 2 92 3961-2 92 4999 bp Feature: gene Location: 2925112-2925585 bp Feature: domain Description: PRK10016 Location: 2925115-2925574 bp Feature: domain Description: PRK10016 Location: 2 92 5115-2 92 5574 bp Feature: gene Location: 2925667-2927154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926072-2926762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 6072 -2 92 6762 bp Feature: gene Location: 2927672-2928835 bp Feature: domain Description: dacD Location: 2927675-2928830 bp Feature: domain Description: dacD Location: 2 92 7675-2 92 8830 bp Feature: gene Location: 2929016-2930440 bp Feature: domain Description: SbcB Location: 2929022-2930438 bp Feature: domain Description: SbcB Location: 2 92 902 2 -2 930438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ089018.1 Klebsiella pneumoniae strain CHS210 genomic scaffold aetAp-supercont1.5, whole genome shotgun sequence (76335 bp)
Overview 1 RT 1: 57206-66379 bp Neighborhood of RT #1 [57206, 66393] fghA_ester_D COG3547 RVT-GII GIIM PHA02517 UvrA UvrA Feature: gene Location: 57206-58042 bp Feature: domain Description: fghA_ester_D Location: 57212-58028 bp Feature: domain Description: fghA_ester_D Location: 57212-58028 bp Feature: gene Location: 58641-59717 bp Feature: domain Description: COG3547 Location: 58680-59601 bp Feature: domain Description: COG3 547 Location: 58680-59601 bp Feature: gene Location: 60259-61782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60532-61264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6053 2-61264 bp Feature: domain Description: GIIM Note: maturase Location: 61378-61537 bp Feature: domain Description: GIIM Note: maturase Location: 613 78-6153 7 bp Feature: gene Location: 62374-62799 bp Feature: domain Description: PHA02517 Location: 62395-62734 bp Feature: domain Description: PHA02517 Location: 623 95-6273 4 bp Feature: gene Location: 63742-66393 bp Feature: domain Description: UvrA Location: 63790-64138 bp Feature: domain Description: UvrA Location: 63 790-6413 8 bp Feature: domain Description: UvrA Location: 64168-66379 bp Feature: domain Description: UvrA Location: 64168-663 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fghA_ester_D (TIGR02821), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), UvrA (COG0178)