myRT

myRT report for GCA_001032935.1_Kleb_pneu_CHS211_V1

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Seq: KQ089012.1 Klebsiella pneumoniae strain CHS211 genomic scaffold aetAy-supercont1.3, whole genome shotgun sequence (138765 bp)
Overview 1 RT 1: 81180-86174 bp Neighborhood of RT #1 [81180, 86176] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 81180-82451 bp Feature: domain Description: umuC Location: 81183-82446 bp Feature: domain Description: umuC Location: 81 1 83-82446 bp Feature: gene Location: 82451-82876 bp Feature: domain Description: PRK10276 Location: 82454-82862 bp Feature: domain Description: PRK1 0276 Location: 82454-82862 bp Feature: gene Location: 83282-84766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83684-84374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83684-84374 bp Feature: gene Location: 85000-85230 bp Feature: gene Location: 85751-86176 bp Feature: domain Description: Antirestrict Location: 85886-86174 bp Feature: domain Description: Antirestrict Location: 85886-861 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089011.1 Klebsiella pneumoniae strain CHS211 genomic scaffold aetAy-supercont1.2, whole genome shotgun sequence (1798332 bp)
Overview 1 RT 1: 585643-592353 bp 2 RT 2: 1030392-1034561 bp 3 RT 3: 1267947-1272468 bp 4 RT 4: 1367587-1373005 bp 5 RT 5: 1544983-1550848 bp Neighborhood of RT #1 [585643, 592544] Collar RVT-GII PRK10276 Neighborhood of RT #2 [1030392, 1034566] YbjK int RVT-GII DinI Neighborhood of RT #3 [1267947, 1272470] bssS PRK10597 RVT-GII PRK05451 PRK10598 Neighborhood of RT #4 [1367587, 1373007] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1544983, 1550850] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 585643-586812 bp Feature: domain Description: Collar Location: 586345-586516 bp Feature: domain Description: Collar Location: 586345-586516 bp Feature: gene Location: 586849-590007 bp Feature: gene Location: 590426-591910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590828-591518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59082 8-591518 bp Feature: gene Location: 591988-592227 bp Feature: gene Location: 592227-592544 bp Feature: domain Description: PRK10276 Location: 592233-592353 bp Feature: domain Description: PRK102 76 Location: 592 2 33-592 353 bp Feature: gene Location: 1030392-1030955 bp Feature: domain Description: YbjK Location: 1030398-1030935 bp Feature: domain Description: YbjK Location: 1030398-1030935 bp Feature: gene Location: 1031078-1032130 bp Feature: domain Description: int Location: 1031081-1032080 bp Feature: domain Description: int Location: 1031081-1032 080 bp Feature: gene Location: 1032549-1034033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032951-1033641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032 951-1033641 bp Feature: gene Location: 1034134-1034322 bp Feature: gene Location: 1034333-1034566 bp Feature: domain Description: DinI Location: 1034375-1034561 bp Feature: domain Description: DinI Location: 1034375-1034561 bp Feature: gene Location: 1267947-1268201 bp Feature: domain Description: bssS Location: 1267950-1268199 bp Feature: domain Description: bssS Location: 12 67950-12 68199 bp Feature: gene Location: 1268504-1268755 bp Feature: domain Description: PRK10597 Location: 1268507-1268744 bp Feature: domain Description: PRK10597 Location: 12 68507-12 68744 bp Feature: gene Location: 1269161-1270645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1269563-1270253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 69563-12 702 53 bp Feature: gene Location: 1270738-1271784 bp Feature: domain Description: PRK05451 Location: 1270753-1271779 bp Feature: domain Description: PRK05451 Location: 12 70753-12 71779 bp Feature: gene Location: 1271910-1272470 bp Feature: domain Description: PRK10598 Location: 1271913-1272468 bp Feature: domain Description: PRK10598 Location: 12 71913-12 72 468 bp Feature: gene Location: 1367587-1368726 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367770-1368670 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367770-1368670 bp Feature: gene Location: 1368897-1369139 bp Feature: domain Description: DinI Location: 1368948-1369128 bp Feature: domain Description: DinI Location: 1368948-136912 8 bp Feature: gene Location: 1369757-1371241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370159-1370849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370159-1370849 bp Feature: gene Location: 1371320-1371739 bp Feature: domain Description: PRK10276 Location: 1371323-1371734 bp Feature: domain Description: PRK102 76 Location: 137132 3-1371734 bp Feature: gene Location: 1371742-1373007 bp Feature: domain Description: umuC Location: 1371745-1373005 bp Feature: domain Description: umuC Location: 1371745-1373005 bp Feature: gene Location: 1544983-1545687 bp Feature: domain Description: Rve Location: 1544986-1545631 bp Feature: domain Description: Rve Location: 1544986-1545631 bp Feature: gene Location: 1545753-1546202 bp Feature: domain Description: PinE Location: 1545762-1546194 bp Feature: domain Description: PinE Location: 1545762 -1546194 bp Feature: gene Location: 1547600-1549084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548002-1548692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548002 -1548692 bp Feature: gene Location: 1549077-1549583 bp Feature: domain Description: PRK10276 Location: 1549167-1549578 bp Feature: domain Description: PRK102 76 Location: 1549167-1549578 bp Feature: gene Location: 1549585-1550850 bp Feature: domain Description: umuC Location: 1549588-1550848 bp Feature: domain Description: umuC Location: 1549588-1550848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), bssS (PRK12301), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05451 (dihydroorotase; Provisional), PRK10598 (lipoprotein; Provisional)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: KQ089010.1 Klebsiella pneumoniae strain CHS211 genomic scaffold aetAy-supercont1.1, whole genome shotgun sequence (3624601 bp)
Overview 1 RT 1: 46390-51427 bp 2 RT 2: 969787-976270 bp Neighborhood of RT #1 [46390, 51453] InsE PHA02517 RVT-GII Rve DDE_Tnp_Tn3 Neighborhood of RT #2 [969787, 976272] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 46390-46692 bp Feature: domain Description: InsE Location: 46399-46681 bp Feature: domain Description: InsE Location: 463 99-46681 bp Feature: gene Location: 46905-47144 bp Feature: domain Description: PHA02517 Location: 46908-47079 bp Feature: domain Description: PHA02517 Location: 46908-47079 bp Feature: gene Location: 47736-48371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48009-48354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48009-483 54 bp Feature: gene Location: 48418-49122 bp Feature: domain Description: Rve Location: 48421-49066 bp Feature: domain Description: Rve Location: 48421-49066 bp Feature: gene Location: 49162-51453 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 50269-51427 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 50269-51427 bp Feature: gene Location: 969787-970845 bp Feature: domain Description: YccC Location: 969793-970831 bp Feature: domain Description: YccC Location: 969793 -97083 1 bp Feature: gene Location: 970944-971417 bp Feature: domain Description: PRK10016 Location: 970947-971406 bp Feature: domain Description: PRK10016 Location: 970947-971406 bp Feature: gene Location: 971499-972983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971901-972591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971901-972591 bp Feature: gene Location: 973504-974667 bp Feature: domain Description: dacD Location: 973507-974662 bp Feature: domain Description: dacD Location: 973 507-974662 bp Feature: gene Location: 974848-976272 bp Feature: domain Description: SbcB Location: 974854-976270 bp Feature: domain Description: SbcB Location: 974854-976270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, Rve (COG3316), DDE_Tnp_Tn3 (pfam01526), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)