myRT

myRT report for GCA_001032965.1_Kleb_pneu_CHS213_V1

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Seq: KQ089028.1 Klebsiella pneumoniae strain CHS213 genomic scaffold aetzW-supercont1.6, whole genome shotgun sequence (501318 bp)
Overview 1 RT 1: 7761-13078 bp Neighborhood of RT #1 [7761, 13080] PinE RVT-GII PRK10276 umuC Feature: gene Location: 7761-7917 bp Feature: gene Location: 7983-8432 bp Feature: domain Description: PinE Location: 7992-8424 bp Feature: domain Description: PinE Location: 7992-8424 bp Feature: gene Location: 9827-11314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10232-10922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0232-1 0922 bp Feature: gene Location: 11307-11813 bp Feature: domain Description: PRK10276 Location: 11397-11808 bp Feature: domain Description: PRK1 0276 Location: 1 1 397-1 1 808 bp Feature: gene Location: 11815-13080 bp Feature: domain Description: umuC Location: 11818-13078 bp Feature: domain Description: umuC Location: 1 1 81 8-1 3078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), RVT-GII

Seq: KQ089024.1 Klebsiella pneumoniae strain CHS213 genomic scaffold aetzW-supercont1.2, whole genome shotgun sequence (1297256 bp)
Overview 1 RT 1: 331761-335168 bp 2 RT 2: 774403-780008 bp 3 RT 3: 1118482-1123900 bp Neighborhood of RT #1 [331761, 335269] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [774403, 780034] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1118482, 1123902] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 331761-332492 bp Feature: domain Description: Laminin_G_3 Location: 332082-332436 bp Feature: domain Description: Laminin_G_3 Location: 332 082 -332 436 bp Feature: gene Location: 332489-332698 bp Feature: gene Location: 333148-334635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333553-334243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333553-3342 43 bp Feature: gene Location: 334713-334952 bp Feature: gene Location: 334952-335269 bp Feature: domain Description: PRK10276 Location: 334958-335072 bp Feature: domain Description: PRK102 76 Location: 334958-335072 bp Feature: domain Description: PRK10276 Location: 335099-335168 bp Feature: domain Description: PRK102 76 Location: 335099-335168 bp Feature: gene Location: 774403-774966 bp Feature: domain Description: YbjK Location: 774409-774946 bp Feature: domain Description: YbjK Location: 774409-774946 bp Feature: gene Location: 775089-776141 bp Feature: domain Description: int Location: 775092-776091 bp Feature: domain Description: int Location: 775092 -776091 bp Feature: gene Location: 776557-778044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776962-777652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776962 -777652 bp Feature: gene Location: 778143-779087 bp Feature: gene Location: 779099-780034 bp Feature: domain Description: Phage_CI_repr Location: 779183-779366 bp Feature: domain Description: Phage_CI_repr Location: 779183-779366 bp Feature: domain Description: Phage_CI_repr Location: 779495-779687 bp Feature: domain Description: Phage_CI_repr Location: 779495-779687 bp Feature: domain Description: Phage_CI_C Location: 779714-780008 bp Feature: domain Description: Phage_CI_C Location: 779714-780008 bp Feature: gene Location: 1118482-1119621 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1118665-1119565 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1118665-1119565 bp Feature: gene Location: 1119792-1120034 bp Feature: domain Description: DinI Location: 1119843-1120023 bp Feature: domain Description: DinI Location: 1119843-112 002 3 bp Feature: gene Location: 1120649-1122136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1121054-1121744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 1054-112 1744 bp Feature: gene Location: 1122215-1122634 bp Feature: domain Description: PRK10276 Location: 1122218-1122629 bp Feature: domain Description: PRK102 76 Location: 112 2 2 18-112 2 62 9 bp Feature: gene Location: 1122637-1123902 bp Feature: domain Description: umuC Location: 1122640-1123900 bp Feature: domain Description: umuC Location: 112 2 640-112 3900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ089030.1 Klebsiella pneumoniae strain CHS213 genomic scaffold aetzW-supercont1.8, whole genome shotgun sequence (176346 bp)
Overview 1 RT 1: 118762-123756 bp Neighborhood of RT #1 [118762, 123758] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 118762-120033 bp Feature: domain Description: umuC Location: 118765-120028 bp Feature: domain Description: umuC Location: 118765-120028 bp Feature: gene Location: 120033-120458 bp Feature: domain Description: PRK10276 Location: 120036-120444 bp Feature: domain Description: PRK10276 Location: 12003 6-120444 bp Feature: gene Location: 120861-122348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121266-121956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121266-121956 bp Feature: gene Location: 122582-122812 bp Feature: gene Location: 123333-123758 bp Feature: domain Description: Antirestrict Location: 123468-123756 bp Feature: domain Description: Antirestrict Location: 123 468-123 756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089023.1 Klebsiella pneumoniae strain CHS213 genomic scaffold aetzW-supercont1.1, whole genome shotgun sequence (1439199 bp)
Overview 1 RT 1: 884448-890931 bp Neighborhood of RT #1 [884448, 890933] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884448-885506 bp Feature: domain Description: YccC Location: 884454-885492 bp Feature: domain Description: YccC Location: 884 4 54 -8854 92 bp Feature: gene Location: 885605-886078 bp Feature: domain Description: PRK10016 Location: 885608-886067 bp Feature: domain Description: PRK10016 Location: 885608-886067 bp Feature: gene Location: 886160-887647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886565-887255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886565-887255 bp Feature: gene Location: 888165-889328 bp Feature: domain Description: dacD Location: 888168-889323 bp Feature: domain Description: dacD Location: 888168-889323 bp Feature: gene Location: 889509-890933 bp Feature: domain Description: SbcB Location: 889515-890931 bp Feature: domain Description: SbcB Location: 889515-890931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)