myRT

myRT report for GCA_001032975.1_Kleb_pneu_CHS214_V1

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Seq: KQ089038.1 Klebsiella pneumoniae strain CHS214 genomic scaffold aetgp-supercont1.3, whole genome shotgun sequence (265279 bp)
Overview 1 RT 1: 38992-44345 bp 2 RT 2: 195218-200212 bp Neighborhood of RT #1 [38992, 44482] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Neighborhood of RT #2 [195218, 200214] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 38992-40263 bp Feature: domain Description: umuC Location: 38995-40255 bp Feature: domain Description: umuC Location: 38995-40255 bp Feature: gene Location: 40263-40694 bp Feature: domain Description: PRK10276 Location: 40314-40677 bp Feature: domain Description: PRK1 0276 Location: 4031 4-40677 bp Feature: gene Location: 40777-42264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41182-41872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 82-41 872 bp Feature: gene Location: 42837-43808 bp Feature: domain Description: StbA Location: 42840-43785 bp Feature: domain Description: StbA Location: 42840-43785 bp Feature: gene Location: 43811-44482 bp Feature: domain Description: Plasmid_stab_B Location: 43826-44033 bp Feature: domain Description: Plasmid_stab_B Location: 43826-44033 bp Feature: domain Description: Plasmid_stab_B Location: 44138-44345 bp Feature: domain Description: Plasmid_stab_B Location: 441 38-44345 bp Feature: gene Location: 195218-196489 bp Feature: domain Description: umuC Location: 195221-196484 bp Feature: domain Description: umuC Location: 1 95221 -1 96484 bp Feature: gene Location: 196489-196914 bp Feature: domain Description: PRK10276 Location: 196492-196900 bp Feature: domain Description: PRK1 0276 Location: 1 96492-1 96900 bp Feature: gene Location: 197317-198804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197722-198412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 97722-1 9841 2 bp Feature: gene Location: 199038-199268 bp Feature: gene Location: 199789-200214 bp Feature: domain Description: Antirestrict Location: 199924-200212 bp Feature: domain Description: Antirestrict Location: 1 99924-20021 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784), Antirestrict (pfam03230)

Seq: KQ089036.1 Klebsiella pneumoniae strain CHS214 genomic scaffold aetgp-supercont1.1, whole genome shotgun sequence (4979166 bp)
Overview 1 RT 1: 439314-444919 bp 2 RT 2: 784599-789330 bp 3 RT 3: 2336595-2343078 bp Neighborhood of RT #1 [439314, 444945] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [784599, 789332] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2336595, 2343080] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 439314-439877 bp Feature: domain Description: YbjK Location: 439320-439857 bp Feature: domain Description: YbjK Location: 43932 0-439857 bp Feature: gene Location: 440000-441052 bp Feature: domain Description: int Location: 440003-441002 bp Feature: domain Description: int Location: 440003-441002 bp Feature: gene Location: 441468-442955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441873-442563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441873-442 563 bp Feature: gene Location: 443054-443998 bp Feature: gene Location: 444010-444945 bp Feature: domain Description: Phage_CI_repr Location: 444094-444277 bp Feature: domain Description: Phage_CI_repr Location: 444094-4442 77 bp Feature: domain Description: Phage_CI_repr Location: 444406-444598 bp Feature: domain Description: Phage_CI_repr Location: 444406-444598 bp Feature: domain Description: Phage_CI_C Location: 444625-444919 bp Feature: domain Description: Phage_CI_C Location: 44462 5-444919 bp Feature: gene Location: 784599-784841 bp Feature: domain Description: DinI Location: 784650-784830 bp Feature: domain Description: DinI Location: 784650-784830 bp Feature: gene Location: 785420-785629 bp Feature: gene Location: 786079-787566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786484-787174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786484-787174 bp Feature: gene Location: 787645-788064 bp Feature: domain Description: PRK10276 Location: 787648-788059 bp Feature: domain Description: PRK102 76 Location: 787648-788059 bp Feature: gene Location: 788067-789332 bp Feature: domain Description: umuC Location: 788070-789330 bp Feature: domain Description: umuC Location: 788070-789330 bp Feature: gene Location: 2336595-2337653 bp Feature: domain Description: YccC Location: 2336601-2337639 bp Feature: domain Description: YccC Location: 2 336601-2 337639 bp Feature: gene Location: 2337752-2338225 bp Feature: domain Description: PRK10016 Location: 2337755-2338214 bp Feature: domain Description: PRK10016 Location: 2 337755-2 3382 14 bp Feature: gene Location: 2338307-2339794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2338712-2339402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 338712 -2 339402 bp Feature: gene Location: 2340312-2341475 bp Feature: domain Description: dacD Location: 2340315-2341470 bp Feature: domain Description: dacD Location: 2 340315-2 341470 bp Feature: gene Location: 2341656-2343080 bp Feature: domain Description: SbcB Location: 2341662-2343078 bp Feature: domain Description: SbcB Location: 2 341662 -2 343078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), SbcB (COG2925)