myRT

myRT report for GCA_001033045.1_Kleb_pneu_CHS217_V1

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Seq: KQ089070.1 Klebsiella pneumoniae strain CHS217 genomic scaffold aetyO-supercont1.6, whole genome shotgun sequence (175100 bp)
Overview 1 RT 1: 117516-122510 bp Neighborhood of RT #1 [117516, 122512] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117516-118787 bp Feature: domain Description: umuC Location: 117519-118782 bp Feature: domain Description: umuC Location: 1 1 751 9-1 1 8782 bp Feature: gene Location: 118787-119212 bp Feature: domain Description: PRK10276 Location: 118790-119198 bp Feature: domain Description: PRK1 0276 Location: 1 1 8790-1 1 91 98 bp Feature: gene Location: 119615-121102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120020-120710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20020-1 2071 0 bp Feature: gene Location: 121336-121566 bp Feature: gene Location: 122087-122512 bp Feature: domain Description: Antirestrict Location: 122222-122510 bp Feature: domain Description: Antirestrict Location: 1 22222-1 2251 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089068.1 Klebsiella pneumoniae strain CHS217 genomic scaffold aetyO-supercont1.4, whole genome shotgun sequence (500302 bp)
Overview 1 RT 1: 11700-16983 bp Neighborhood of RT #1 [11700, 16985] PinE RVT-GII PRK10276 umuC Feature: gene Location: 11700-11822 bp Feature: gene Location: 11888-12337 bp Feature: domain Description: PinE Location: 11897-12329 bp Feature: domain Description: PinE Location: 11897-12 32 9 bp Feature: gene Location: 13732-15219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14137-14827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14137-1482 7 bp Feature: gene Location: 15212-15718 bp Feature: domain Description: PRK10276 Location: 15302-15713 bp Feature: domain Description: PRK102 76 Location: 15302 -15713 bp Feature: gene Location: 15720-16985 bp Feature: domain Description: umuC Location: 15723-16983 bp Feature: domain Description: umuC Location: 1572 3-16983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ089065.1 Klebsiella pneumoniae strain CHS217 genomic scaffold aetyO-supercont1.1, whole genome shotgun sequence (1516256 bp)
Overview 1 RT 1: 583855-587262 bp 2 RT 2: 1026497-1032102 bp 3 RT 3: 1370906-1376324 bp Neighborhood of RT #1 [583855, 587363] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026497, 1032128] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370906, 1376326] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 583855-584586 bp Feature: domain Description: Laminin_G_3 Location: 584176-584530 bp Feature: domain Description: Laminin_G_3 Location: 584176-58453 0 bp Feature: gene Location: 584583-584792 bp Feature: gene Location: 585242-586729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585647-586337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585647-5863 3 7 bp Feature: gene Location: 586807-587046 bp Feature: gene Location: 587046-587363 bp Feature: domain Description: PRK10276 Location: 587052-587166 bp Feature: domain Description: PRK10276 Location: 587052-587166 bp Feature: domain Description: PRK10276 Location: 587193-587262 bp Feature: domain Description: PRK10276 Location: 587193 -587262 bp Feature: gene Location: 1026497-1027060 bp Feature: domain Description: YbjK Location: 1026503-1027040 bp Feature: domain Description: YbjK Location: 1026503 -1027040 bp Feature: gene Location: 1027183-1028235 bp Feature: domain Description: int Location: 1027186-1028185 bp Feature: domain Description: int Location: 1027186-1028185 bp Feature: gene Location: 1028651-1030138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029056-1029746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029056-1029746 bp Feature: gene Location: 1030237-1031181 bp Feature: gene Location: 1031193-1032128 bp Feature: domain Description: Phage_CI_repr Location: 1031277-1031460 bp Feature: domain Description: Phage_CI_repr Location: 103 1277-103 1460 bp Feature: domain Description: Phage_CI_repr Location: 1031589-1031781 bp Feature: domain Description: Phage_CI_repr Location: 103 1589-103 1781 bp Feature: domain Description: Phage_CI_C Location: 1031808-1032102 bp Feature: domain Description: Phage_CI_C Location: 103 1808-103 2102 bp Feature: gene Location: 1370906-1372045 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371089-1371989 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 71089-13 71989 bp Feature: gene Location: 1372216-1372458 bp Feature: domain Description: DinI Location: 1372267-1372447 bp Feature: domain Description: DinI Location: 13 72267-13 72447 bp Feature: gene Location: 1373073-1374560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373478-1374168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 73 478-13 74168 bp Feature: gene Location: 1374639-1375058 bp Feature: domain Description: PRK10276 Location: 1374642-1375053 bp Feature: domain Description: PRK10276 Location: 13 74642-13 75053 bp Feature: gene Location: 1375061-1376326 bp Feature: domain Description: umuC Location: 1375064-1376324 bp Feature: domain Description: umuC Location: 13 75064-13 763 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ089066.1 Klebsiella pneumoniae strain CHS217 genomic scaffold aetyO-supercont1.2, whole genome shotgun sequence (1440955 bp)
Overview 1 RT 1: 886191-892674 bp Neighborhood of RT #1 [886191, 892676] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886191-887249 bp Feature: domain Description: YccC Location: 886197-887235 bp Feature: domain Description: YccC Location: 886197-887235 bp Feature: gene Location: 887348-887821 bp Feature: domain Description: PRK10016 Location: 887351-887810 bp Feature: domain Description: PRK10016 Location: 887351-887810 bp Feature: gene Location: 887903-889390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888308-888998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888308-888998 bp Feature: gene Location: 889908-891071 bp Feature: domain Description: dacD Location: 889911-891066 bp Feature: domain Description: dacD Location: 889911-891066 bp Feature: gene Location: 891252-892676 bp Feature: domain Description: SbcB Location: 891258-892674 bp Feature: domain Description: SbcB Location: 891258-892674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)