myRT

myRT report for GCA_001033085.1_Kleb_pneu_CHS219_V1

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Seq: KQ089077.1 Klebsiella pneumoniae strain CHS219 genomic scaffold aetga-supercont1.1, whole genome shotgun sequence (5570251 bp)
Overview 1 RT 1: 1029070-1034675 bp 2 RT 2: 1372618-1378036 bp 3 RT 3: 1558165-1563487 bp Neighborhood of RT #1 [1029070, 1034701] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1372618, 1378038] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1558165, 1563489] PinE RVT-GII PRK10276 umuC Feature: gene Location: 1029070-1029633 bp Feature: domain Description: YbjK Location: 1029076-1029613 bp Feature: domain Description: YbjK Location: 1 029076-1 02961 3 bp Feature: gene Location: 1029756-1030808 bp Feature: domain Description: int Location: 1029759-1030758 bp Feature: domain Description: int Location: 1 029759-1 030758 bp Feature: gene Location: 1031224-1032711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031629-1032319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 629-1 03231 9 bp Feature: gene Location: 1032810-1033754 bp Feature: gene Location: 1033766-1034701 bp Feature: domain Description: Phage_CI_repr Location: 1033850-1034033 bp Feature: domain Description: Phage_CI_repr Location: 1 033850-1 034033 bp Feature: domain Description: Phage_CI_repr Location: 1034162-1034354 bp Feature: domain Description: Phage_CI_repr Location: 1 0341 62-1 034354 bp Feature: domain Description: Phage_CI_C Location: 1034381-1034675 bp Feature: domain Description: Phage_CI_C Location: 1 034381 -1 034675 bp Feature: gene Location: 1372618-1373757 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372801-1373701 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 372801 -1 373701 bp Feature: gene Location: 1373928-1374170 bp Feature: domain Description: DinI Location: 1373979-1374159 bp Feature: domain Description: DinI Location: 1 373979-1 3741 59 bp Feature: gene Location: 1374785-1376272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375190-1375880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3751 90-1 375880 bp Feature: gene Location: 1376351-1376770 bp Feature: domain Description: PRK10276 Location: 1376354-1376765 bp Feature: domain Description: PRK1 0276 Location: 1 376354-1 376765 bp Feature: gene Location: 1376773-1378038 bp Feature: domain Description: umuC Location: 1376776-1378036 bp Feature: domain Description: umuC Location: 1 376776-1 378036 bp Feature: gene Location: 1558165-1558326 bp Feature: gene Location: 1558392-1558841 bp Feature: domain Description: PinE Location: 1558401-1558833 bp Feature: domain Description: PinE Location: 1 558401 -1 558833 bp Feature: gene Location: 1560236-1561723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560641-1561331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 560641 -1 561 331 bp Feature: gene Location: 1561716-1562222 bp Feature: domain Description: PRK10276 Location: 1561806-1562217 bp Feature: domain Description: PRK1 0276 Location: 1 561 806-1 56221 7 bp Feature: gene Location: 1562224-1563489 bp Feature: domain Description: umuC Location: 1562227-1563487 bp Feature: domain Description: umuC Location: 1 562227-1 563487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961)

Seq: KQ089078.1 Klebsiella pneumoniae strain CHS219 genomic scaffold aetga-supercont1.2, whole genome shotgun sequence (290723 bp)
Overview 1 RT 1: 71100-76453 bp 2 RT 2: 221704-226698 bp Neighborhood of RT #1 [71100, 76590] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Neighborhood of RT #2 [221704, 226700] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 71100-72371 bp Feature: domain Description: umuC Location: 71103-72363 bp Feature: domain Description: umuC Location: 71103-72 363 bp Feature: gene Location: 72371-72802 bp Feature: domain Description: PRK10276 Location: 72422-72785 bp Feature: domain Description: PRK102 76 Location: 72 42 2 -72 785 bp Feature: gene Location: 72885-74372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73290-73980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 732 90-73980 bp Feature: gene Location: 74945-75916 bp Feature: domain Description: StbA Location: 74948-75893 bp Feature: domain Description: StbA Location: 74948-75893 bp Feature: gene Location: 75919-76590 bp Feature: domain Description: Plasmid_stab_B Location: 75934-76141 bp Feature: domain Description: Plasmid_stab_B Location: 75934-76141 bp Feature: domain Description: Plasmid_stab_B Location: 76246-76453 bp Feature: domain Description: Plasmid_stab_B Location: 762 46-76453 bp Feature: gene Location: 221704-222975 bp Feature: domain Description: umuC Location: 221707-222970 bp Feature: domain Description: umuC Location: 2 2 1707-2 2 2 970 bp Feature: gene Location: 222975-223400 bp Feature: domain Description: PRK10276 Location: 222978-223386 bp Feature: domain Description: PRK102 76 Location: 2 2 2 978-2 2 3386 bp Feature: gene Location: 223803-225290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224208-224898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 42 08-2 2 4898 bp Feature: gene Location: 225524-225754 bp Feature: gene Location: 226275-226700 bp Feature: domain Description: Antirestrict Location: 226410-226698 bp Feature: domain Description: Antirestrict Location: 2 2 6410-2 2 6698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784), Antirestrict (pfam03230)