myRT

myRT report for GCA_001033095.1_Kleb_pneu_CHS220_V1

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Seq: KQ089082.1 Klebsiella pneumoniae strain CHS220 genomic scaffold aetyP-supercont1.2, whole genome shotgun sequence (1860273 bp)
Overview 1 RT 1: 330824-334231 bp 2 RT 2: 773606-779211 bp 3 RT 3: 1116709-1122127 bp 4 RT 4: 1300406-1305809 bp Neighborhood of RT #1 [330824, 334332] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [773606, 779237] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1116709, 1122129] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1300406, 1305811] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 330824-331555 bp Feature: domain Description: Laminin_G_3 Location: 331145-331499 bp Feature: domain Description: Laminin_G_3 Location: 331 1 45-331 499 bp Feature: gene Location: 331552-331761 bp Feature: gene Location: 332211-333698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332616-333306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33261 6-333306 bp Feature: gene Location: 333776-334015 bp Feature: gene Location: 334015-334332 bp Feature: domain Description: PRK10276 Location: 334021-334135 bp Feature: domain Description: PRK1 0276 Location: 334021 -3341 35 bp Feature: domain Description: PRK10276 Location: 334162-334231 bp Feature: domain Description: PRK1 0276 Location: 3341 62-334231 bp Feature: gene Location: 773606-774169 bp Feature: domain Description: YbjK Location: 773612-774149 bp Feature: domain Description: YbjK Location: 77361 2-7741 49 bp Feature: gene Location: 774292-775344 bp Feature: domain Description: int Location: 774295-775294 bp Feature: domain Description: int Location: 774295-775294 bp Feature: gene Location: 775760-777247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776165-776855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7761 65-776855 bp Feature: gene Location: 777346-778290 bp Feature: gene Location: 778302-779237 bp Feature: domain Description: Phage_CI_repr Location: 778386-778569 bp Feature: domain Description: Phage_CI_repr Location: 778386-778569 bp Feature: domain Description: Phage_CI_repr Location: 778698-778890 bp Feature: domain Description: Phage_CI_repr Location: 778698-778890 bp Feature: domain Description: Phage_CI_C Location: 778917-779211 bp Feature: domain Description: Phage_CI_C Location: 77891 7-77921 1 bp Feature: gene Location: 1116709-1117848 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1116892-1117792 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 6892-1 1 1 7792 bp Feature: gene Location: 1118019-1118261 bp Feature: domain Description: DinI Location: 1118070-1118250 bp Feature: domain Description: DinI Location: 1 1 1 8070-1 1 1 8250 bp Feature: gene Location: 1118876-1120363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119281-1119971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 9281 -1 1 1 9971 bp Feature: gene Location: 1120442-1120861 bp Feature: domain Description: PRK10276 Location: 1120445-1120856 bp Feature: domain Description: PRK1 0276 Location: 1 1 20445-1 1 20856 bp Feature: gene Location: 1120864-1122129 bp Feature: domain Description: umuC Location: 1120867-1122127 bp Feature: domain Description: umuC Location: 1 1 20867-1 1 221 27 bp Feature: gene Location: 1300406-1300648 bp Feature: domain Description: Rve Location: 1300421-1300592 bp Feature: domain Description: Rve Location: 1 300421 -1 300592 bp Feature: gene Location: 1300714-1301163 bp Feature: domain Description: PinE Location: 1300723-1301155 bp Feature: domain Description: PinE Location: 1 300723-1 301 1 55 bp Feature: gene Location: 1302558-1304045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302963-1303653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 302963-1 303653 bp Feature: gene Location: 1304038-1304544 bp Feature: domain Description: PRK10276 Location: 1304128-1304539 bp Feature: domain Description: PRK1 0276 Location: 1 3041 28-1 304539 bp Feature: gene Location: 1304546-1305811 bp Feature: domain Description: umuC Location: 1304549-1305809 bp Feature: domain Description: umuC Location: 1 304549-1 305809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ089086.1 Klebsiella pneumoniae strain CHS220 genomic scaffold aetyP-supercont1.6, whole genome shotgun sequence (140920 bp)
Overview 1 RT 1: 83335-88329 bp Neighborhood of RT #1 [83335, 88331] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 83335-84606 bp Feature: domain Description: umuC Location: 83338-84601 bp Feature: domain Description: umuC Location: 83338-84601 bp Feature: gene Location: 84606-85031 bp Feature: domain Description: PRK10276 Location: 84609-85017 bp Feature: domain Description: PRK102 76 Location: 84609-85017 bp Feature: gene Location: 85434-86921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85839-86529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85839-8652 9 bp Feature: gene Location: 87155-87385 bp Feature: gene Location: 87906-88331 bp Feature: domain Description: Antirestrict Location: 88041-88329 bp Feature: domain Description: Antirestrict Location: 88041-8832 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089081.1 Klebsiella pneumoniae strain CHS220 genomic scaffold aetyP-supercont1.1, whole genome shotgun sequence (2292320 bp)
Overview 1 RT 1: 887558-894041 bp Neighborhood of RT #1 [887558, 894043] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887558-888616 bp Feature: domain Description: YccC Location: 887564-888602 bp Feature: domain Description: YccC Location: 887564-888602 bp Feature: gene Location: 888715-889188 bp Feature: domain Description: PRK10016 Location: 888718-889177 bp Feature: domain Description: PRK10016 Location: 888718-889177 bp Feature: gene Location: 889270-890757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889675-890365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889675-8903 65 bp Feature: gene Location: 891275-892438 bp Feature: domain Description: dacD Location: 891278-892433 bp Feature: domain Description: dacD Location: 891278-89243 3 bp Feature: gene Location: 892619-894043 bp Feature: domain Description: SbcB Location: 892625-894041 bp Feature: domain Description: SbcB Location: 892625-894041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)