myRT

myRT report for GCA_001033125.1_Kleb_pneu_CHS221_V1

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Seq: KQ089094.1 Klebsiella pneumoniae strain CHS221 genomic scaffold aetzr-supercont1.1, whole genome shotgun sequence (4331099 bp)
Overview 1 RT 1: 588603-592010 bp 2 RT 2: 1031585-1037190 bp 3 RT 3: 1375010-1380428 bp 4 RT 4: 1559063-1564516 bp 5 RT 5: 2925808-2932291 bp Neighborhood of RT #1 [588603, 592111] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1031585, 1037216] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1375010, 1380430] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1559063, 1564518] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2925808, 2932293] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 588603-589334 bp Feature: domain Description: Laminin_G_3 Location: 588924-589278 bp Feature: domain Description: Laminin_G_3 Location: 588924-589278 bp Feature: gene Location: 589331-589540 bp Feature: gene Location: 589993-591477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590395-591085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590395-591 085 bp Feature: gene Location: 591555-591794 bp Feature: gene Location: 591794-592111 bp Feature: domain Description: PRK10276 Location: 591800-591914 bp Feature: domain Description: PRK1 0276 Location: 591 800-591 91 4 bp Feature: domain Description: PRK10276 Location: 591941-592010 bp Feature: domain Description: PRK1 0276 Location: 591 941 -59201 0 bp Feature: gene Location: 1031585-1032148 bp Feature: domain Description: YbjK Location: 1031591-1032128 bp Feature: domain Description: YbjK Location: 1 031 591 -1 0321 28 bp Feature: gene Location: 1032271-1033323 bp Feature: domain Description: int Location: 1032274-1033273 bp Feature: domain Description: int Location: 1 032274-1 033273 bp Feature: gene Location: 1033742-1035226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034144-1034834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0341 44-1 034834 bp Feature: gene Location: 1035325-1036269 bp Feature: gene Location: 1036281-1037216 bp Feature: domain Description: Phage_CI_repr Location: 1036365-1036548 bp Feature: domain Description: Phage_CI_repr Location: 1 036365-1 036548 bp Feature: domain Description: Phage_CI_repr Location: 1036677-1036869 bp Feature: domain Description: Phage_CI_repr Location: 1 036677-1 036869 bp Feature: domain Description: Phage_CI_C Location: 1036896-1037190 bp Feature: domain Description: Phage_CI_C Location: 1 036896-1 0371 90 bp Feature: gene Location: 1375010-1376149 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375193-1376093 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 3751 93-1 376093 bp Feature: gene Location: 1376320-1376562 bp Feature: domain Description: DinI Location: 1376371-1376551 bp Feature: domain Description: DinI Location: 1 376371 -1 376551 bp Feature: gene Location: 1377180-1378664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377582-1378272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 377582-1 378272 bp Feature: gene Location: 1378743-1379162 bp Feature: domain Description: PRK10276 Location: 1378746-1379157 bp Feature: domain Description: PRK1 0276 Location: 1 378746-1 3791 57 bp Feature: gene Location: 1379165-1380430 bp Feature: domain Description: umuC Location: 1379168-1380428 bp Feature: domain Description: umuC Location: 1 3791 68-1 380428 bp Feature: gene Location: 1559063-1559355 bp Feature: gene Location: 1559421-1559870 bp Feature: domain Description: PinE Location: 1559430-1559862 bp Feature: domain Description: PinE Location: 1 559430-1 559862 bp Feature: gene Location: 1561268-1562752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561670-1562360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 561 670-1 562360 bp Feature: gene Location: 1562745-1563251 bp Feature: domain Description: PRK10276 Location: 1562835-1563246 bp Feature: domain Description: PRK1 0276 Location: 1 562835-1 563246 bp Feature: gene Location: 1563253-1564518 bp Feature: domain Description: umuC Location: 1563256-1564516 bp Feature: domain Description: umuC Location: 1 563256-1 56451 6 bp Feature: gene Location: 2925808-2926866 bp Feature: domain Description: YccC Location: 2925814-2926852 bp Feature: domain Description: YccC Location: 292581 4-2926852 bp Feature: gene Location: 2926965-2927438 bp Feature: domain Description: PRK10016 Location: 2926968-2927427 bp Feature: domain Description: PRK1 001 6 Location: 2926968-2927427 bp Feature: gene Location: 2927520-2929004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927922-2928612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927922-292861 2 bp Feature: gene Location: 2929525-2930688 bp Feature: domain Description: dacD Location: 2929528-2930683 bp Feature: domain Description: dacD Location: 2929528-2930683 bp Feature: gene Location: 2930869-2932293 bp Feature: domain Description: SbcB Location: 2930875-2932291 bp Feature: domain Description: SbcB Location: 2930875-2932291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ089097.1 Klebsiella pneumoniae strain CHS221 genomic scaffold aetzr-supercont1.4, whole genome shotgun sequence (83675 bp)
Overview 1 RT 1: 54153-59506 bp Neighborhood of RT #1 [54153, 59643] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 54153-55424 bp Feature: domain Description: umuC Location: 54156-55416 bp Feature: domain Description: umuC Location: 54156-55416 bp Feature: gene Location: 55424-55855 bp Feature: domain Description: PRK10276 Location: 55475-55838 bp Feature: domain Description: PRK102 76 Location: 55475-55838 bp Feature: gene Location: 55938-57422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56340-57030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56340-57030 bp Feature: gene Location: 57998-58969 bp Feature: domain Description: StbA Location: 58001-58946 bp Feature: domain Description: StbA Location: 58001-58946 bp Feature: gene Location: 58972-59643 bp Feature: domain Description: Plasmid_stab_B Location: 58987-59194 bp Feature: domain Description: Plasmid_stab_B Location: 58987-59194 bp Feature: domain Description: Plasmid_stab_B Location: 59299-59506 bp Feature: domain Description: Plasmid_stab_B Location: 592 99-59506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)