myRT

myRT report for GCA_001033135.1_Kleb_pneu_CHS223_V1

Download annotations/find similar RTs

Seq: KQ089101.1 Klebsiella pneumoniae strain CHS223 genomic scaffold aetgd-supercont1.1, whole genome shotgun sequence (3422617 bp)
Overview 1 RT 1: 1031296-1036901 bp 2 RT 2: 1377342-1381991 bp 3 RT 3: 2867486-2873969 bp Neighborhood of RT #1 [1031296, 1036927] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1377342, 1381993] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2867486, 2873971] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1031296-1031859 bp Feature: domain Description: YbjK Location: 1031302-1031839 bp Feature: domain Description: YbjK Location: 1 031 302-1 031 839 bp Feature: gene Location: 1031982-1033034 bp Feature: domain Description: int Location: 1031985-1032984 bp Feature: domain Description: int Location: 1 031 985-1 032984 bp Feature: gene Location: 1033453-1034937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1033855-1034545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 033855-1 034545 bp Feature: gene Location: 1035036-1035980 bp Feature: gene Location: 1035992-1036927 bp Feature: domain Description: Phage_CI_repr Location: 1036076-1036259 bp Feature: domain Description: Phage_CI_repr Location: 1 036076-1 036259 bp Feature: domain Description: Phage_CI_repr Location: 1036388-1036580 bp Feature: domain Description: Phage_CI_repr Location: 1 036388-1 036580 bp Feature: domain Description: Phage_CI_C Location: 1036607-1036901 bp Feature: domain Description: Phage_CI_C Location: 1 036607-1 036901 bp Feature: gene Location: 1377342-1377584 bp Feature: domain Description: DinI Location: 1377393-1377573 bp Feature: domain Description: DinI Location: 1 377393-1 377573 bp Feature: gene Location: 1378104-1378290 bp Feature: gene Location: 1378743-1380227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379145-1379835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3791 45-1 379835 bp Feature: gene Location: 1380306-1380725 bp Feature: domain Description: PRK10276 Location: 1380309-1380720 bp Feature: domain Description: PRK1 0276 Location: 1 380309-1 380720 bp Feature: gene Location: 1380728-1381993 bp Feature: domain Description: umuC Location: 1380731-1381991 bp Feature: domain Description: umuC Location: 1 380731 -1 381 991 bp Feature: gene Location: 2867486-2868544 bp Feature: domain Description: YccC Location: 2867492-2868530 bp Feature: domain Description: YccC Location: 2867492-2868530 bp Feature: gene Location: 2868643-2869116 bp Feature: domain Description: PRK10016 Location: 2868646-2869105 bp Feature: domain Description: PRK1 001 6 Location: 2868646-28691 05 bp Feature: gene Location: 2869198-2870682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869600-2870290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869600-2870290 bp Feature: gene Location: 2871203-2872366 bp Feature: domain Description: dacD Location: 2871206-2872361 bp Feature: domain Description: dacD Location: 2871 206-2872361 bp Feature: gene Location: 2872547-2873971 bp Feature: domain Description: SbcB Location: 2872553-2873969 bp Feature: domain Description: SbcB Location: 2872553-2873969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), SbcB (COG2925)