myRT

myRT report for GCA_001033165.1_Kleb_pneu_CHS224_V1

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Seq: KQ089111.1 Klebsiella pneumoniae strain CHS224 genomic scaffold aeuse-supercont1.3, whole genome shotgun sequence (174472 bp)
Overview 1 RT 1: 89808-94802 bp Neighborhood of RT #1 [89808, 94804] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 89808-91079 bp Feature: domain Description: umuC Location: 89811-91074 bp Feature: domain Description: umuC Location: 8981 1 -91 074 bp Feature: gene Location: 91079-91504 bp Feature: domain Description: PRK10276 Location: 91082-91490 bp Feature: domain Description: PRK1 0276 Location: 91 082-91 490 bp Feature: gene Location: 91907-93394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92312-93002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9231 2-93002 bp Feature: gene Location: 93628-93858 bp Feature: gene Location: 94379-94804 bp Feature: domain Description: Antirestrict Location: 94514-94802 bp Feature: domain Description: Antirestrict Location: 9451 4-94802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089112.1 Klebsiella pneumoniae strain CHS224 genomic scaffold aeuse-supercont1.4, whole genome shotgun sequence (66725 bp)
Overview 1 RT 1: 13470-18823 bp Neighborhood of RT #1 [13470, 18960] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13470-14741 bp Feature: domain Description: umuC Location: 13473-14733 bp Feature: domain Description: umuC Location: 13473-14733 bp Feature: gene Location: 14741-15172 bp Feature: domain Description: PRK10276 Location: 14792-15155 bp Feature: domain Description: PRK102 76 Location: 14792 -15155 bp Feature: gene Location: 15255-16742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15660-16350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15660-16350 bp Feature: gene Location: 17315-18286 bp Feature: domain Description: StbA Location: 17318-18263 bp Feature: domain Description: StbA Location: 17318-182 63 bp Feature: gene Location: 18289-18960 bp Feature: domain Description: Plasmid_stab_B Location: 18304-18511 bp Feature: domain Description: Plasmid_stab_B Location: 18304-18511 bp Feature: domain Description: Plasmid_stab_B Location: 18616-18823 bp Feature: domain Description: Plasmid_stab_B Location: 18616-1882 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ089109.1 Klebsiella pneumoniae strain CHS224 genomic scaffold aeuse-supercont1.1, whole genome shotgun sequence (3530008 bp)
Overview 1 RT 1: 883115-889598 bp Neighborhood of RT #1 [883115, 889600] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883115-884173 bp Feature: domain Description: YccC Location: 883121-884159 bp Feature: domain Description: YccC Location: 883 121-884159 bp Feature: gene Location: 884272-884745 bp Feature: domain Description: PRK10016 Location: 884275-884734 bp Feature: domain Description: PRK10016 Location: 884275-88473 4 bp Feature: gene Location: 884827-886314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885232-885922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88523 2-885922 bp Feature: gene Location: 886832-887995 bp Feature: domain Description: dacD Location: 886835-887990 bp Feature: domain Description: dacD Location: 88683 5-887990 bp Feature: gene Location: 888176-889600 bp Feature: domain Description: SbcB Location: 888182-889598 bp Feature: domain Description: SbcB Location: 888182-889598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089110.1 Klebsiella pneumoniae strain CHS224 genomic scaffold aeuse-supercont1.2, whole genome shotgun sequence (2036289 bp)
Overview 1 RT 1: 583321-586728 bp 2 RT 2: 1026026-1031631 bp 3 RT 3: 1369303-1374721 bp 4 RT 4: 1554539-1560404 bp Neighborhood of RT #1 [583321, 586829] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026026, 1031657] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369303, 1374723] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554539, 1560406] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583321-584052 bp Feature: domain Description: Laminin_G_3 Location: 583639-583996 bp Feature: domain Description: Laminin_G_3 Location: 583639-583996 bp Feature: gene Location: 584049-584258 bp Feature: gene Location: 584708-586195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585113-585803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585113-585803 bp Feature: gene Location: 586273-586512 bp Feature: gene Location: 586512-586829 bp Feature: domain Description: PRK10276 Location: 586518-586632 bp Feature: domain Description: PRK10276 Location: 586518-586632 bp Feature: domain Description: PRK10276 Location: 586659-586728 bp Feature: domain Description: PRK10276 Location: 586659-586728 bp Feature: gene Location: 1026026-1026589 bp Feature: domain Description: YbjK Location: 1026032-1026569 bp Feature: domain Description: YbjK Location: 1026032-1026569 bp Feature: gene Location: 1026712-1027764 bp Feature: domain Description: int Location: 1026715-1027714 bp Feature: domain Description: int Location: 1026715-1027714 bp Feature: gene Location: 1028180-1029667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028585-1029275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028585-1029275 bp Feature: gene Location: 1029766-1030710 bp Feature: gene Location: 1030722-1031657 bp Feature: domain Description: Phage_CI_repr Location: 1030806-1030989 bp Feature: domain Description: Phage_CI_repr Location: 1030806-1030989 bp Feature: domain Description: Phage_CI_repr Location: 1031118-1031310 bp Feature: domain Description: Phage_CI_repr Location: 1031118-1031310 bp Feature: domain Description: Phage_CI_C Location: 1031337-1031631 bp Feature: domain Description: Phage_CI_C Location: 1031337-1031631 bp Feature: gene Location: 1369303-1370442 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369486-1370386 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13694 86-1370386 bp Feature: gene Location: 1370613-1370855 bp Feature: domain Description: DinI Location: 1370664-1370844 bp Feature: domain Description: DinI Location: 1370664 -137084 4 bp Feature: gene Location: 1371470-1372957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371875-1372565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371875-1372565 bp Feature: gene Location: 1373036-1373455 bp Feature: domain Description: PRK10276 Location: 1373039-1373450 bp Feature: domain Description: PRK10276 Location: 1373039-13734 50 bp Feature: gene Location: 1373458-1374723 bp Feature: domain Description: umuC Location: 1373461-1374721 bp Feature: domain Description: umuC Location: 13734 61-1374 721 bp Feature: gene Location: 1554539-1555243 bp Feature: domain Description: Rve Location: 1554542-1555187 bp Feature: domain Description: Rve Location: 1554 54 2-1555187 bp Feature: gene Location: 1555309-1555758 bp Feature: domain Description: PinE Location: 1555318-1555750 bp Feature: domain Description: PinE Location: 1555318-1555750 bp Feature: gene Location: 1557153-1558640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557558-1558248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557558-155824 8 bp Feature: gene Location: 1558633-1559139 bp Feature: domain Description: PRK10276 Location: 1558723-1559134 bp Feature: domain Description: PRK10276 Location: 1558723-1559134 bp Feature: gene Location: 1559141-1560406 bp Feature: domain Description: umuC Location: 1559144-1560404 bp Feature: domain Description: umuC Location: 155914 4 -15604 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)