myRT

myRT report for GCA_001033175.1_Kleb_pneu_CHS225_V1

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Seq: KQ089119.1 Klebsiella pneumoniae strain CHS225 genomic scaffold aeurM-supercont1.2, whole genome shotgun sequence (2047201 bp)
Overview 1 RT 1: 583491-586898 bp 2 RT 2: 1025924-1031529 bp 3 RT 3: 1370322-1375740 bp 4 RT 4: 1557876-1563276 bp Neighborhood of RT #1 [583491, 586999] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025924, 1031555] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370322, 1375742] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1557876, 1563278] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583491-584222 bp Feature: domain Description: Laminin_G_3 Location: 583812-584166 bp Feature: domain Description: Laminin_G_3 Location: 58381 2-5841 66 bp Feature: gene Location: 584219-584428 bp Feature: gene Location: 584878-586365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585283-585973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585283-585973 bp Feature: gene Location: 586443-586682 bp Feature: gene Location: 586682-586999 bp Feature: domain Description: PRK10276 Location: 586688-586802 bp Feature: domain Description: PRK1 0276 Location: 586688-586802 bp Feature: domain Description: PRK10276 Location: 586829-586898 bp Feature: domain Description: PRK1 0276 Location: 586829-586898 bp Feature: gene Location: 1025924-1026487 bp Feature: domain Description: YbjK Location: 1025930-1026467 bp Feature: domain Description: YbjK Location: 1 025930-1 026467 bp Feature: gene Location: 1026610-1027662 bp Feature: domain Description: int Location: 1026613-1027612 bp Feature: domain Description: int Location: 1 02661 3-1 02761 2 bp Feature: gene Location: 1028078-1029565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028483-1029173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028483-1 0291 73 bp Feature: gene Location: 1029664-1030608 bp Feature: gene Location: 1030620-1031555 bp Feature: domain Description: Phage_CI_repr Location: 1030704-1030887 bp Feature: domain Description: Phage_CI_repr Location: 1 030704-1 030887 bp Feature: domain Description: Phage_CI_repr Location: 1031016-1031208 bp Feature: domain Description: Phage_CI_repr Location: 1 031 01 6-1 031 208 bp Feature: domain Description: Phage_CI_C Location: 1031235-1031529 bp Feature: domain Description: Phage_CI_C Location: 1 031 235-1 031 529 bp Feature: gene Location: 1370322-1371461 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370505-1371405 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370505-1 371 405 bp Feature: gene Location: 1371632-1371874 bp Feature: domain Description: DinI Location: 1371683-1371863 bp Feature: domain Description: DinI Location: 1 371 683-1 371 863 bp Feature: gene Location: 1372489-1373976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372894-1373584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372894-1 373584 bp Feature: gene Location: 1374055-1374474 bp Feature: domain Description: PRK10276 Location: 1374058-1374469 bp Feature: domain Description: PRK1 0276 Location: 1 374058-1 374469 bp Feature: gene Location: 1374477-1375742 bp Feature: domain Description: umuC Location: 1374480-1375740 bp Feature: domain Description: umuC Location: 1 374480-1 375740 bp Feature: gene Location: 1557876-1558115 bp Feature: domain Description: Rve Location: 1557888-1558059 bp Feature: domain Description: Rve Location: 1 557888-1 558059 bp Feature: gene Location: 1558181-1558630 bp Feature: domain Description: PinE Location: 1558190-1558622 bp Feature: domain Description: PinE Location: 1 5581 90-1 558622 bp Feature: gene Location: 1560025-1561512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560430-1561120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 560430-1 561 1 20 bp Feature: gene Location: 1561505-1562011 bp Feature: domain Description: PRK10276 Location: 1561595-1562006 bp Feature: domain Description: PRK1 0276 Location: 1 561 595-1 562006 bp Feature: gene Location: 1562013-1563278 bp Feature: domain Description: umuC Location: 1562016-1563276 bp Feature: domain Description: umuC Location: 1 56201 6-1 563276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ089120.1 Klebsiella pneumoniae strain CHS225 genomic scaffold aeurM-supercont1.3, whole genome shotgun sequence (188334 bp)
Overview 1 RT 1: 130750-135744 bp Neighborhood of RT #1 [130750, 135746] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 130750-132021 bp Feature: domain Description: umuC Location: 130753-132016 bp Feature: domain Description: umuC Location: 130753-132 016 bp Feature: gene Location: 132021-132446 bp Feature: domain Description: PRK10276 Location: 132024-132432 bp Feature: domain Description: PRK102 76 Location: 132 02 4-132 432 bp Feature: gene Location: 132849-134336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133254-133944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1332 54-133944 bp Feature: gene Location: 134570-134800 bp Feature: gene Location: 135321-135746 bp Feature: domain Description: Antirestrict Location: 135456-135744 bp Feature: domain Description: Antirestrict Location: 135456-135744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089118.1 Klebsiella pneumoniae strain CHS225 genomic scaffold aeurM-supercont1.1, whole genome shotgun sequence (3530979 bp)
Overview 1 RT 1: 884515-890998 bp Neighborhood of RT #1 [884515, 891000] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884515-885573 bp Feature: domain Description: YccC Location: 884521-885559 bp Feature: domain Description: YccC Location: 884521-885559 bp Feature: gene Location: 885672-886145 bp Feature: domain Description: PRK10016 Location: 885675-886134 bp Feature: domain Description: PRK10016 Location: 885675-88613 4 bp Feature: gene Location: 886227-887714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886632-887322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88663 2-8873 22 bp Feature: gene Location: 888232-889395 bp Feature: domain Description: dacD Location: 888235-889390 bp Feature: domain Description: dacD Location: 88823 5-8893 90 bp Feature: gene Location: 889576-891000 bp Feature: domain Description: SbcB Location: 889582-890998 bp Feature: domain Description: SbcB Location: 889582-890998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)