myRT

myRT report for GCA_001033205.1_Kleb_pneu_CHS226_V1

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Seq: KQ089131.1 Klebsiella pneumoniae strain CHS226 genomic scaffold aeurW-supercont1.1, whole genome shotgun sequence (5439308 bp)
Overview 1 RT 1: 448371-451778 bp 2 RT 2: 891013-896618 bp 3 RT 3: 1234325-1239743 bp 4 RT 4: 1420395-1426260 bp 5 RT 5: 2793849-2800332 bp Neighborhood of RT #1 [448371, 451879] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [891013, 896644] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1234325, 1239745] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1420395, 1426262] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2793849, 2800334] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 448371-449102 bp Feature: domain Description: Laminin_G_3 Location: 448692-449046 bp Feature: domain Description: Laminin_G_3 Location: 448692-449046 bp Feature: gene Location: 449099-449308 bp Feature: gene Location: 449761-451245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450163-450853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4501 63-450853 bp Feature: gene Location: 451323-451562 bp Feature: gene Location: 451562-451879 bp Feature: domain Description: PRK10276 Location: 451568-451682 bp Feature: domain Description: PRK1 0276 Location: 451 568-451 682 bp Feature: domain Description: PRK10276 Location: 451709-451778 bp Feature: domain Description: PRK1 0276 Location: 451 709-451 778 bp Feature: gene Location: 891013-891576 bp Feature: domain Description: YbjK Location: 891019-891556 bp Feature: domain Description: YbjK Location: 891 01 9-891 556 bp Feature: gene Location: 891699-892751 bp Feature: domain Description: int Location: 891702-892701 bp Feature: domain Description: int Location: 891 702-892701 bp Feature: gene Location: 893170-894654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893572-894262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893572-894262 bp Feature: gene Location: 894753-895697 bp Feature: gene Location: 895709-896644 bp Feature: domain Description: Phage_CI_repr Location: 895793-895976 bp Feature: domain Description: Phage_CI_repr Location: 895793-895976 bp Feature: domain Description: Phage_CI_repr Location: 896105-896297 bp Feature: domain Description: Phage_CI_repr Location: 8961 05-896297 bp Feature: domain Description: Phage_CI_C Location: 896324-896618 bp Feature: domain Description: Phage_CI_C Location: 896324-89661 8 bp Feature: gene Location: 1234325-1235464 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1234508-1235408 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 234508-1 235408 bp Feature: gene Location: 1235635-1235877 bp Feature: domain Description: DinI Location: 1235686-1235866 bp Feature: domain Description: DinI Location: 1 235686-1 235866 bp Feature: gene Location: 1236495-1237979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1236897-1237587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 236897-1 237587 bp Feature: gene Location: 1238058-1238477 bp Feature: domain Description: PRK10276 Location: 1238061-1238472 bp Feature: domain Description: PRK1 0276 Location: 1 238061 -1 238472 bp Feature: gene Location: 1238480-1239745 bp Feature: domain Description: umuC Location: 1238483-1239743 bp Feature: domain Description: umuC Location: 1 238483-1 239743 bp Feature: gene Location: 1420395-1421099 bp Feature: domain Description: Rve Location: 1420398-1421043 bp Feature: domain Description: Rve Location: 1 420398-1 421 043 bp Feature: gene Location: 1421165-1421614 bp Feature: domain Description: PinE Location: 1421174-1421606 bp Feature: domain Description: PinE Location: 1 421 1 74-1 421 606 bp Feature: gene Location: 1423012-1424496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1423414-1424104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42341 4-1 4241 04 bp Feature: gene Location: 1424489-1424995 bp Feature: domain Description: PRK10276 Location: 1424579-1424990 bp Feature: domain Description: PRK1 0276 Location: 1 424579-1 424990 bp Feature: gene Location: 1424997-1426262 bp Feature: domain Description: umuC Location: 1425000-1426260 bp Feature: domain Description: umuC Location: 1 425000-1 426260 bp Feature: gene Location: 2793849-2794907 bp Feature: domain Description: YccC Location: 2793855-2794893 bp Feature: domain Description: YccC Location: 2793855-2794893 bp Feature: gene Location: 2795006-2795479 bp Feature: domain Description: PRK10016 Location: 2795009-2795468 bp Feature: domain Description: PRK1 001 6 Location: 2795009-2795468 bp Feature: gene Location: 2795561-2797045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2795963-2796653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2795963-2796653 bp Feature: gene Location: 2797566-2798729 bp Feature: domain Description: dacD Location: 2797569-2798724 bp Feature: domain Description: dacD Location: 2797569-2798724 bp Feature: gene Location: 2798910-2800334 bp Feature: domain Description: SbcB Location: 2798916-2800332 bp Feature: domain Description: SbcB Location: 279891 6-2800332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)