myRT

myRT report for GCA_001033215.1_Kleb_pneu_CHS228_V1

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Seq: KQ089123.1 Klebsiella pneumoniae strain CHS228 genomic scaffold aeurs-supercont1.1, whole genome shotgun sequence (2996943 bp)
Overview 1 RT 1: 887536-894019 bp Neighborhood of RT #1 [887536, 894021] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887536-888594 bp Feature: domain Description: YccC Location: 887542-888580 bp Feature: domain Description: YccC Location: 887542-888580 bp Feature: gene Location: 888693-889166 bp Feature: domain Description: PRK10016 Location: 888696-889155 bp Feature: domain Description: PRK1 001 6 Location: 888696-8891 55 bp Feature: gene Location: 889248-890735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889653-890343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889653-890343 bp Feature: gene Location: 891253-892416 bp Feature: domain Description: dacD Location: 891256-892411 bp Feature: domain Description: dacD Location: 891 256-89241 1 bp Feature: gene Location: 892597-894021 bp Feature: domain Description: SbcB Location: 892603-894019 bp Feature: domain Description: SbcB Location: 892603-89401 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089124.1 Klebsiella pneumoniae strain CHS228 genomic scaffold aeurs-supercont1.2, whole genome shotgun sequence (2049424 bp)
Overview 1 RT 1: 583314-586721 bp 2 RT 2: 1026259-1031864 bp 3 RT 3: 1370196-1375614 bp 4 RT 4: 1556688-1562553 bp Neighborhood of RT #1 [583314, 586822] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026259, 1031890] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370196, 1375616] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1556688, 1562555] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583314-584045 bp Feature: domain Description: Laminin_G_3 Location: 583635-583989 bp Feature: domain Description: Laminin_G_3 Location: 583635-583989 bp Feature: gene Location: 584042-584251 bp Feature: gene Location: 584701-586188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585106-585796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585106-585796 bp Feature: gene Location: 586266-586505 bp Feature: gene Location: 586505-586822 bp Feature: domain Description: PRK10276 Location: 586511-586625 bp Feature: domain Description: PRK102 76 Location: 586511-58662 5 bp Feature: domain Description: PRK10276 Location: 586652-586721 bp Feature: domain Description: PRK102 76 Location: 586652 -58672 1 bp Feature: gene Location: 1026259-1026822 bp Feature: domain Description: YbjK Location: 1026265-1026802 bp Feature: domain Description: YbjK Location: 102 62 65-102 6802 bp Feature: gene Location: 1026945-1027997 bp Feature: domain Description: int Location: 1026948-1027947 bp Feature: domain Description: int Location: 102 6948-102 7947 bp Feature: gene Location: 1028413-1029900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028818-1029508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8818-102 9508 bp Feature: gene Location: 1029999-1030943 bp Feature: gene Location: 1030955-1031890 bp Feature: domain Description: Phage_CI_repr Location: 1031039-1031222 bp Feature: domain Description: Phage_CI_repr Location: 1031039-10312 2 2 bp Feature: domain Description: Phage_CI_repr Location: 1031351-1031543 bp Feature: domain Description: Phage_CI_repr Location: 1031351-1031543 bp Feature: domain Description: Phage_CI_C Location: 1031570-1031864 bp Feature: domain Description: Phage_CI_C Location: 1031570-1031864 bp Feature: gene Location: 1370196-1371335 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370379-1371279 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370379-13712 79 bp Feature: gene Location: 1371506-1371748 bp Feature: domain Description: DinI Location: 1371557-1371737 bp Feature: domain Description: DinI Location: 1371557-1371737 bp Feature: gene Location: 1372363-1373850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372768-1373458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 768-1373458 bp Feature: gene Location: 1373929-1374348 bp Feature: domain Description: PRK10276 Location: 1373932-1374343 bp Feature: domain Description: PRK102 76 Location: 1373932 -1374343 bp Feature: gene Location: 1374351-1375616 bp Feature: domain Description: umuC Location: 1374354-1375614 bp Feature: domain Description: umuC Location: 1374354-1375614 bp Feature: gene Location: 1556688-1557392 bp Feature: domain Description: Rve Location: 1556691-1557336 bp Feature: domain Description: Rve Location: 1556691-1557336 bp Feature: gene Location: 1557458-1557907 bp Feature: domain Description: PinE Location: 1557467-1557899 bp Feature: domain Description: PinE Location: 1557467-1557899 bp Feature: gene Location: 1559302-1560789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559707-1560397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559707-1560397 bp Feature: gene Location: 1560782-1561288 bp Feature: domain Description: PRK10276 Location: 1560872-1561283 bp Feature: domain Description: PRK102 76 Location: 1560872 -15612 83 bp Feature: gene Location: 1561290-1562555 bp Feature: domain Description: umuC Location: 1561293-1562553 bp Feature: domain Description: umuC Location: 15612 93-1562 553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ089126.1 Klebsiella pneumoniae strain CHS228 genomic scaffold aeurs-supercont1.4, whole genome shotgun sequence (175233 bp)
Overview 1 RT 1: 117650-122644 bp Neighborhood of RT #1 [117650, 122646] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117650-118921 bp Feature: domain Description: umuC Location: 117653-118916 bp Feature: domain Description: umuC Location: 117653 -118916 bp Feature: gene Location: 118921-119346 bp Feature: domain Description: PRK10276 Location: 118924-119332 bp Feature: domain Description: PRK10276 Location: 118924-1193 3 2 bp Feature: gene Location: 119749-121236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120154-120844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120154-120844 bp Feature: gene Location: 121470-121700 bp Feature: gene Location: 122221-122646 bp Feature: domain Description: Antirestrict Location: 122356-122644 bp Feature: domain Description: Antirestrict Location: 1223 56-122644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)