myRT

myRT report for GCA_001033255.1_Kleb_pneu_CHS230_V1

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Seq: KQ089143.1 Klebsiella pneumoniae strain CHS230 genomic scaffold aeusj-supercont1.1, whole genome shotgun sequence (3528100 bp)
Overview 1 RT 1: 884629-891112 bp Neighborhood of RT #1 [884629, 891114] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884629-885687 bp Feature: domain Description: YccC Location: 884635-885673 bp Feature: domain Description: YccC Location: 884635-885673 bp Feature: gene Location: 885786-886259 bp Feature: domain Description: PRK10016 Location: 885789-886248 bp Feature: domain Description: PRK1 001 6 Location: 885789-886248 bp Feature: gene Location: 886341-887828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886746-887436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886746-887436 bp Feature: gene Location: 888346-889509 bp Feature: domain Description: dacD Location: 888349-889504 bp Feature: domain Description: dacD Location: 888349-889504 bp Feature: gene Location: 889690-891114 bp Feature: domain Description: SbcB Location: 889696-891112 bp Feature: domain Description: SbcB Location: 889696-891 1 1 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089144.1 Klebsiella pneumoniae strain CHS230 genomic scaffold aeusj-supercont1.2, whole genome shotgun sequence (2045434 bp)
Overview 1 RT 1: 583247-586654 bp 2 RT 2: 1025889-1031494 bp 3 RT 3: 1369950-1375368 bp 4 RT 4: 1555637-1561502 bp Neighborhood of RT #1 [583247, 586755] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025889, 1031520] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369950, 1375370] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555637, 1561504] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583247-583978 bp Feature: domain Description: Laminin_G_3 Location: 583568-583922 bp Feature: domain Description: Laminin_G_3 Location: 583568-58392 2 bp Feature: gene Location: 583975-584184 bp Feature: gene Location: 584634-586121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585039-585729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585039-58572 9 bp Feature: gene Location: 586199-586438 bp Feature: gene Location: 586438-586755 bp Feature: domain Description: PRK10276 Location: 586444-586558 bp Feature: domain Description: PRK102 76 Location: 586444-586558 bp Feature: domain Description: PRK10276 Location: 586585-586654 bp Feature: domain Description: PRK102 76 Location: 586585-586654 bp Feature: gene Location: 1025889-1026452 bp Feature: domain Description: YbjK Location: 1025895-1026432 bp Feature: domain Description: YbjK Location: 102 5895-102 6432 bp Feature: gene Location: 1026575-1027627 bp Feature: domain Description: int Location: 1026578-1027577 bp Feature: domain Description: int Location: 102 6578-102 7577 bp Feature: gene Location: 1028043-1029530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028448-1029138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8448-102 9138 bp Feature: gene Location: 1029629-1030573 bp Feature: gene Location: 1030585-1031520 bp Feature: domain Description: Phage_CI_repr Location: 1030669-1030852 bp Feature: domain Description: Phage_CI_repr Location: 1030669-1030852 bp Feature: domain Description: Phage_CI_repr Location: 1030981-1031173 bp Feature: domain Description: Phage_CI_repr Location: 1030981-1031173 bp Feature: domain Description: Phage_CI_C Location: 1031200-1031494 bp Feature: domain Description: Phage_CI_C Location: 10312 00-1031494 bp Feature: gene Location: 1369950-1371089 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370133-1371033 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370133-1371033 bp Feature: gene Location: 1371260-1371502 bp Feature: domain Description: DinI Location: 1371311-1371491 bp Feature: domain Description: DinI Location: 1371311-1371491 bp Feature: gene Location: 1372117-1373604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372522-1373212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 52 2 -13732 12 bp Feature: gene Location: 1373683-1374102 bp Feature: domain Description: PRK10276 Location: 1373686-1374097 bp Feature: domain Description: PRK102 76 Location: 1373686-1374097 bp Feature: gene Location: 1374105-1375370 bp Feature: domain Description: umuC Location: 1374108-1375368 bp Feature: domain Description: umuC Location: 1374108-1375368 bp Feature: gene Location: 1555637-1556341 bp Feature: domain Description: Rve Location: 1555640-1556285 bp Feature: domain Description: Rve Location: 1555640-15562 85 bp Feature: gene Location: 1556407-1556856 bp Feature: domain Description: PinE Location: 1556416-1556848 bp Feature: domain Description: PinE Location: 1556416-1556848 bp Feature: gene Location: 1558251-1559738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558656-1559346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558656-1559346 bp Feature: gene Location: 1559731-1560237 bp Feature: domain Description: PRK10276 Location: 1559821-1560232 bp Feature: domain Description: PRK102 76 Location: 155982 1-15602 32 bp Feature: gene Location: 1560239-1561504 bp Feature: domain Description: umuC Location: 1560242-1561502 bp Feature: domain Description: umuC Location: 15602 42 -1561502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ089145.1 Klebsiella pneumoniae strain CHS230 genomic scaffold aeusj-supercont1.3, whole genome shotgun sequence (177672 bp)
Overview 1 RT 1: 120088-125082 bp Neighborhood of RT #1 [120088, 125084] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 120088-121359 bp Feature: domain Description: umuC Location: 120091-121354 bp Feature: domain Description: umuC Location: 120091-1213 54 bp Feature: gene Location: 121359-121784 bp Feature: domain Description: PRK10276 Location: 121362-121770 bp Feature: domain Description: PRK10276 Location: 1213 62-121770 bp Feature: gene Location: 122187-123674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122592-123282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122592-123 282 bp Feature: gene Location: 123908-124138 bp Feature: gene Location: 124659-125084 bp Feature: domain Description: Antirestrict Location: 124794-125082 bp Feature: domain Description: Antirestrict Location: 124794-125082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)