myRT

myRT report for GCA_001033285.1_Kleb_pneu_CHS231_V1

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Seq: KQ089154.1 Klebsiella pneumoniae strain CHS231 genomic scaffold aeusu-supercont1.3, whole genome shotgun sequence (119890 bp)
Overview 1 RT 1: 62306-67300 bp Neighborhood of RT #1 [62306, 67302] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 62306-63577 bp Feature: domain Description: umuC Location: 62309-63572 bp Feature: domain Description: umuC Location: 62309-63572 bp Feature: gene Location: 63577-64002 bp Feature: domain Description: PRK10276 Location: 63580-63988 bp Feature: domain Description: PRK1 0276 Location: 63580-63988 bp Feature: gene Location: 64405-65892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64810-65500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6481 0-65500 bp Feature: gene Location: 66126-66356 bp Feature: gene Location: 66877-67302 bp Feature: domain Description: Antirestrict Location: 67012-67300 bp Feature: domain Description: Antirestrict Location: 6701 2-67300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089152.1 Klebsiella pneumoniae strain CHS231 genomic scaffold aeusu-supercont1.1, whole genome shotgun sequence (4859566 bp)
Overview 1 RT 1: 583367-586774 bp 2 RT 2: 1025937-1031542 bp 3 RT 3: 1369562-1374980 bp 4 RT 4: 1553089-1558954 bp 5 RT 5: 2755413-2761896 bp Neighborhood of RT #1 [583367, 586875] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025937, 1031568] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369562, 1374982] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553089, 1558956] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2755413, 2761898] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583367-584098 bp Feature: domain Description: Laminin_G_3 Location: 583688-584042 bp Feature: domain Description: Laminin_G_3 Location: 583688-584042 bp Feature: gene Location: 584095-584304 bp Feature: gene Location: 584754-586241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585159-585849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585159-585849 bp Feature: gene Location: 586319-586558 bp Feature: gene Location: 586558-586875 bp Feature: domain Description: PRK10276 Location: 586564-586678 bp Feature: domain Description: PRK102 76 Location: 586564-586678 bp Feature: domain Description: PRK10276 Location: 586705-586774 bp Feature: domain Description: PRK102 76 Location: 586705-586774 bp Feature: gene Location: 1025937-1026500 bp Feature: domain Description: YbjK Location: 1025943-1026480 bp Feature: domain Description: YbjK Location: 102 5943-102 6480 bp Feature: gene Location: 1026623-1027675 bp Feature: domain Description: int Location: 1026626-1027625 bp Feature: domain Description: int Location: 102 662 6-102 762 5 bp Feature: gene Location: 1028091-1029578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028496-1029186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8496-102 9186 bp Feature: gene Location: 1029677-1030621 bp Feature: gene Location: 1030633-1031568 bp Feature: domain Description: Phage_CI_repr Location: 1030717-1030900 bp Feature: domain Description: Phage_CI_repr Location: 1030717-1030900 bp Feature: domain Description: Phage_CI_repr Location: 1031029-1031221 bp Feature: domain Description: Phage_CI_repr Location: 103102 9-10312 2 1 bp Feature: domain Description: Phage_CI_C Location: 1031248-1031542 bp Feature: domain Description: Phage_CI_C Location: 10312 48-1031542 bp Feature: gene Location: 1369562-1370701 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369745-1370645 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369745-1370645 bp Feature: gene Location: 1370872-1371114 bp Feature: domain Description: DinI Location: 1370923-1371103 bp Feature: domain Description: DinI Location: 137092 3-1371103 bp Feature: gene Location: 1371729-1373216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372134-1372824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 134-1372 82 4 bp Feature: gene Location: 1373295-1373714 bp Feature: domain Description: PRK10276 Location: 1373298-1373709 bp Feature: domain Description: PRK102 76 Location: 13732 98-1373709 bp Feature: gene Location: 1373717-1374982 bp Feature: domain Description: umuC Location: 1373720-1374980 bp Feature: domain Description: umuC Location: 137372 0-1374980 bp Feature: gene Location: 1553089-1553793 bp Feature: domain Description: Rve Location: 1553092-1553737 bp Feature: domain Description: Rve Location: 1553092 -1553737 bp Feature: gene Location: 1553859-1554308 bp Feature: domain Description: PinE Location: 1553868-1554300 bp Feature: domain Description: PinE Location: 1553868-1554300 bp Feature: gene Location: 1555703-1557190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556108-1556798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556108-1556798 bp Feature: gene Location: 1557183-1557689 bp Feature: domain Description: PRK10276 Location: 1557273-1557684 bp Feature: domain Description: PRK102 76 Location: 15572 73-1557684 bp Feature: gene Location: 1557691-1558956 bp Feature: domain Description: umuC Location: 1557694-1558954 bp Feature: domain Description: umuC Location: 1557694-1558954 bp Feature: gene Location: 2755413-2756471 bp Feature: domain Description: YccC Location: 2755419-2756457 bp Feature: domain Description: YccC Location: 2 755419-2 756457 bp Feature: gene Location: 2756570-2757043 bp Feature: domain Description: PRK10016 Location: 2756573-2757032 bp Feature: domain Description: PRK10016 Location: 2 756573-2 757032 bp Feature: gene Location: 2757125-2758612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757530-2758220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 757530-2 7582 2 0 bp Feature: gene Location: 2759130-2760293 bp Feature: domain Description: dacD Location: 2759133-2760288 bp Feature: domain Description: dacD Location: 2 759133-2 7602 88 bp Feature: gene Location: 2760474-2761898 bp Feature: domain Description: SbcB Location: 2760480-2761896 bp Feature: domain Description: SbcB Location: 2 760480-2 761896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)