myRT

myRT report for GCA_001033295.1_Kleb_pneu_CHS232_V1

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Seq: KQ089162.1 Klebsiella pneumoniae strain CHS232 genomic scaffold aeurS-supercont1.3, whole genome shotgun sequence (142040 bp)
Overview 1 RT 1: 84456-89450 bp Neighborhood of RT #1 [84456, 89452] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 84456-85727 bp Feature: domain Description: umuC Location: 84459-85722 bp Feature: domain Description: umuC Location: 84459-85722 bp Feature: gene Location: 85727-86152 bp Feature: domain Description: PRK10276 Location: 85730-86138 bp Feature: domain Description: PRK1 0276 Location: 85730-861 38 bp Feature: gene Location: 86555-88042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86960-87650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86960-87650 bp Feature: gene Location: 88276-88506 bp Feature: gene Location: 89027-89452 bp Feature: domain Description: Antirestrict Location: 89162-89450 bp Feature: domain Description: Antirestrict Location: 891 62-89450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089161.1 Klebsiella pneumoniae strain CHS232 genomic scaffold aeurS-supercont1.2, whole genome shotgun sequence (2036280 bp)
Overview 1 RT 1: 583470-586877 bp 2 RT 2: 1027419-1033024 bp 3 RT 3: 1370617-1376035 bp 4 RT 4: 1554144-1560009 bp Neighborhood of RT #1 [583470, 586978] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027419, 1033050] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370617, 1376037] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554144, 1560011] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583470-584201 bp Feature: domain Description: Laminin_G_3 Location: 583791-584145 bp Feature: domain Description: Laminin_G_3 Location: 583791-584145 bp Feature: gene Location: 584198-584407 bp Feature: gene Location: 584857-586344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585262-585952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5852 62 -585952 bp Feature: gene Location: 586422-586661 bp Feature: gene Location: 586661-586978 bp Feature: domain Description: PRK10276 Location: 586667-586781 bp Feature: domain Description: PRK102 76 Location: 586667-586781 bp Feature: domain Description: PRK10276 Location: 586808-586877 bp Feature: domain Description: PRK102 76 Location: 586808-586877 bp Feature: gene Location: 1027419-1027982 bp Feature: domain Description: YbjK Location: 1027425-1027962 bp Feature: domain Description: YbjK Location: 102 742 5-102 7962 bp Feature: gene Location: 1028105-1029157 bp Feature: domain Description: int Location: 1028108-1029107 bp Feature: domain Description: int Location: 102 8108-102 9107 bp Feature: gene Location: 1029573-1031060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029978-1030668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 9978-1030668 bp Feature: gene Location: 1031159-1032103 bp Feature: gene Location: 1032115-1033050 bp Feature: domain Description: Phage_CI_repr Location: 1032199-1032382 bp Feature: domain Description: Phage_CI_repr Location: 1032 199-1032 382 bp Feature: domain Description: Phage_CI_repr Location: 1032511-1032703 bp Feature: domain Description: Phage_CI_repr Location: 1032 511-1032 703 bp Feature: domain Description: Phage_CI_C Location: 1032730-1033024 bp Feature: domain Description: Phage_CI_C Location: 1032 730-103302 4 bp Feature: gene Location: 1370617-1371756 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370800-1371700 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370800-1371700 bp Feature: gene Location: 1371927-1372169 bp Feature: domain Description: DinI Location: 1371978-1372158 bp Feature: domain Description: DinI Location: 1371978-1372 158 bp Feature: gene Location: 1372784-1374271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373189-1373879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373189-1373879 bp Feature: gene Location: 1374350-1374769 bp Feature: domain Description: PRK10276 Location: 1374353-1374764 bp Feature: domain Description: PRK102 76 Location: 1374353-1374764 bp Feature: gene Location: 1374772-1376037 bp Feature: domain Description: umuC Location: 1374775-1376035 bp Feature: domain Description: umuC Location: 1374775-1376035 bp Feature: gene Location: 1554144-1554848 bp Feature: domain Description: Rve Location: 1554147-1554792 bp Feature: domain Description: Rve Location: 1554147-1554792 bp Feature: gene Location: 1554914-1555363 bp Feature: domain Description: PinE Location: 1554923-1555355 bp Feature: domain Description: PinE Location: 155492 3-1555355 bp Feature: gene Location: 1556758-1558245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557163-1557853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557163-1557853 bp Feature: gene Location: 1558238-1558744 bp Feature: domain Description: PRK10276 Location: 1558328-1558739 bp Feature: domain Description: PRK102 76 Location: 155832 8-1558739 bp Feature: gene Location: 1558746-1560011 bp Feature: domain Description: umuC Location: 1558749-1560009 bp Feature: domain Description: umuC Location: 1558749-1560009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ089160.1 Klebsiella pneumoniae strain CHS232 genomic scaffold aeurS-supercont1.1, whole genome shotgun sequence (3525909 bp)
Overview 1 RT 1: 883009-889492 bp Neighborhood of RT #1 [883009, 889494] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883009-884067 bp Feature: domain Description: YccC Location: 883015-884053 bp Feature: domain Description: YccC Location: 883 015-884053 bp Feature: gene Location: 884166-884639 bp Feature: domain Description: PRK10016 Location: 884169-884628 bp Feature: domain Description: PRK10016 Location: 884169-884628 bp Feature: gene Location: 884721-886208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885126-885816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885126-885816 bp Feature: gene Location: 886726-887889 bp Feature: domain Description: dacD Location: 886729-887884 bp Feature: domain Description: dacD Location: 886729-887884 bp Feature: gene Location: 888070-889494 bp Feature: domain Description: SbcB Location: 888076-889492 bp Feature: domain Description: SbcB Location: 888076-889492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)