myRT

myRT report for GCA_001033305.1_Kleb_pneu_CHS234_V1

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Seq: KQ089175.1 Klebsiella pneumoniae strain CHS234 genomic scaffold aeurm-supercont1.8, whole genome shotgun sequence (144222 bp)
Overview 1 RT 1: 65089-69493 bp 2 RT 2: 86638-91632 bp Neighborhood of RT #1 [65089, 69493] DDE_Tnp_IS1 BetT RVT-GII PRK09928 Neighborhood of RT #2 [86638, 91634] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 65089-65382 bp Feature: domain Description: DDE_Tnp_IS1 Location: 65092-65380 bp Feature: domain Description: DDE_Tnp_IS1 Location: 65092-65380 bp Feature: gene Location: 65534-67012 bp Feature: domain Description: BetT Location: 65564-67004 bp Feature: domain Description: BetT Location: 65564-67004 bp Feature: gene Location: 67061-68545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67463-68153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67463-681 53 bp Feature: gene Location: 68944-69441 bp Feature: domain Description: PRK09928 Location: 68965-69439 bp Feature: domain Description: PRK09928 Location: 68965-69439 bp Feature: gene Location: 69386-69493 bp Feature: gene Location: 86638-87909 bp Feature: domain Description: umuC Location: 86641-87904 bp Feature: domain Description: umuC Location: 86641 -87904 bp Feature: gene Location: 87909-88334 bp Feature: domain Description: PRK10276 Location: 87912-88320 bp Feature: domain Description: PRK1 0276 Location: 8791 2-88320 bp Feature: gene Location: 88740-90224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89142-89832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891 42-89832 bp Feature: gene Location: 90458-90688 bp Feature: gene Location: 91209-91634 bp Feature: domain Description: Antirestrict Location: 91344-91632 bp Feature: domain Description: Antirestrict Location: 91 344-91 632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, PRK09928 (choline transport protein BetT; Provisional), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Antirestrict (pfam03230)

Seq: KQ089169.1 Klebsiella pneumoniae strain CHS234 genomic scaffold aeurm-supercont1.2, whole genome shotgun sequence (1306466 bp)
Overview 1 RT 1: 754732-761215 bp Neighborhood of RT #1 [754732, 761217] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 754732-755790 bp Feature: domain Description: YccC Location: 754738-755776 bp Feature: domain Description: YccC Location: 754738-755776 bp Feature: gene Location: 755889-756362 bp Feature: domain Description: PRK10016 Location: 755892-756351 bp Feature: domain Description: PRK10016 Location: 755892 -756351 bp Feature: gene Location: 756444-757928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756846-757536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756846-757536 bp Feature: gene Location: 758449-759612 bp Feature: domain Description: dacD Location: 758452-759607 bp Feature: domain Description: dacD Location: 758452 -759607 bp Feature: gene Location: 759793-761217 bp Feature: domain Description: SbcB Location: 759799-761215 bp Feature: domain Description: SbcB Location: 759799-7612 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089168.1 Klebsiella pneumoniae strain CHS234 genomic scaffold aeurm-supercont1.1, whole genome shotgun sequence (1450709 bp)
Overview 1 RT 1: 441132-446737 bp 2 RT 2: 784433-789851 bp 3 RT 3: 967840-973705 bp Neighborhood of RT #1 [441132, 446763] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [784433, 789853] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [967840, 973707] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 441132-441695 bp Feature: domain Description: YbjK Location: 441138-441675 bp Feature: domain Description: YbjK Location: 44113 8-441675 bp Feature: gene Location: 441818-442870 bp Feature: domain Description: int Location: 441821-442820 bp Feature: domain Description: int Location: 441821-442820 bp Feature: gene Location: 443289-444773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443691-444381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 691-4443 81 bp Feature: gene Location: 444872-445816 bp Feature: gene Location: 445828-446763 bp Feature: domain Description: Phage_CI_repr Location: 445912-446095 bp Feature: domain Description: Phage_CI_repr Location: 445912-446095 bp Feature: domain Description: Phage_CI_repr Location: 446224-446416 bp Feature: domain Description: Phage_CI_repr Location: 446224-446416 bp Feature: domain Description: Phage_CI_C Location: 446443-446737 bp Feature: domain Description: Phage_CI_C Location: 446443 -44673 7 bp Feature: gene Location: 784433-785572 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 784616-785516 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 784616-785516 bp Feature: gene Location: 785743-785985 bp Feature: domain Description: DinI Location: 785794-785974 bp Feature: domain Description: DinI Location: 785794-785974 bp Feature: gene Location: 786603-788087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787005-787695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787005-787695 bp Feature: gene Location: 788166-788585 bp Feature: domain Description: PRK10276 Location: 788169-788580 bp Feature: domain Description: PRK10276 Location: 788169-788580 bp Feature: gene Location: 788588-789853 bp Feature: domain Description: umuC Location: 788591-789851 bp Feature: domain Description: umuC Location: 788591-789851 bp Feature: gene Location: 967840-968544 bp Feature: domain Description: Rve Location: 967843-968488 bp Feature: domain Description: Rve Location: 967843 -968488 bp Feature: gene Location: 968610-969059 bp Feature: domain Description: PinE Location: 968619-969051 bp Feature: domain Description: PinE Location: 968619-969051 bp Feature: gene Location: 970457-971941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 970859-971549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 970859-971549 bp Feature: gene Location: 971934-972440 bp Feature: domain Description: PRK10276 Location: 972024-972435 bp Feature: domain Description: PRK10276 Location: 972024-97243 5 bp Feature: gene Location: 972442-973707 bp Feature: domain Description: umuC Location: 972445-973705 bp Feature: domain Description: umuC Location: 972445-973 705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961)