myRT

myRT report for GCA_001033335.1_Kleb_pneu_CHS235_V1

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Seq: KQ089184.1 Klebsiella pneumoniae strain CHS235 genomic scaffold aeurr-supercont1.1, whole genome shotgun sequence (3369353 bp)
Overview 1 RT 1: 887445-893928 bp Neighborhood of RT #1 [887445, 893930] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887445-888503 bp Feature: domain Description: YccC Location: 887451-888489 bp Feature: domain Description: YccC Location: 887451 -888489 bp Feature: gene Location: 888602-889075 bp Feature: domain Description: PRK10016 Location: 888605-889064 bp Feature: domain Description: PRK1 001 6 Location: 888605-889064 bp Feature: gene Location: 889157-890641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889559-890249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889559-890249 bp Feature: gene Location: 891162-892325 bp Feature: domain Description: dacD Location: 891165-892320 bp Feature: domain Description: dacD Location: 891 1 65-892320 bp Feature: gene Location: 892506-893930 bp Feature: domain Description: SbcB Location: 892512-893928 bp Feature: domain Description: SbcB Location: 89251 2-893928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089185.1 Klebsiella pneumoniae strain CHS235 genomic scaffold aeurr-supercont1.2, whole genome shotgun sequence (2188678 bp)
Overview 1 RT 1: 731846-735253 bp 2 RT 2: 1175893-1181498 bp 3 RT 3: 1518983-1524401 bp 4 RT 4: 1704766-1710631 bp Neighborhood of RT #1 [731846, 735354] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1175893, 1181524] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1518983, 1524403] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1704766, 1710633] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 731846-732577 bp Feature: domain Description: Laminin_G_3 Location: 732167-732521 bp Feature: domain Description: Laminin_G_3 Location: 732 167-732 52 1 bp Feature: gene Location: 732574-732783 bp Feature: gene Location: 733236-734720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733638-734328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733638-73432 8 bp Feature: gene Location: 734798-735037 bp Feature: gene Location: 735037-735354 bp Feature: domain Description: PRK10276 Location: 735043-735157 bp Feature: domain Description: PRK102 76 Location: 735043-735157 bp Feature: domain Description: PRK10276 Location: 735184-735253 bp Feature: domain Description: PRK102 76 Location: 735184-7352 53 bp Feature: gene Location: 1175893-1176456 bp Feature: domain Description: YbjK Location: 1175899-1176436 bp Feature: domain Description: YbjK Location: 1175899-1176436 bp Feature: gene Location: 1176579-1177631 bp Feature: domain Description: int Location: 1176582-1177581 bp Feature: domain Description: int Location: 1176582 -1177581 bp Feature: gene Location: 1178050-1179534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178452-1179142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178452 -1179142 bp Feature: gene Location: 1179633-1180577 bp Feature: gene Location: 1180589-1181524 bp Feature: domain Description: Phage_CI_repr Location: 1180673-1180856 bp Feature: domain Description: Phage_CI_repr Location: 1180673-1180856 bp Feature: domain Description: Phage_CI_repr Location: 1180985-1181177 bp Feature: domain Description: Phage_CI_repr Location: 1180985-1181177 bp Feature: domain Description: Phage_CI_C Location: 1181204-1181498 bp Feature: domain Description: Phage_CI_C Location: 11812 04-1181498 bp Feature: gene Location: 1518983-1520122 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1519166-1520066 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1519166-152 0066 bp Feature: gene Location: 1520293-1520535 bp Feature: domain Description: DinI Location: 1520344-1520524 bp Feature: domain Description: DinI Location: 152 0344-152 052 4 bp Feature: gene Location: 1521153-1522637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521555-1522245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 1555-152 2 2 45 bp Feature: gene Location: 1522716-1523135 bp Feature: domain Description: PRK10276 Location: 1522719-1523130 bp Feature: domain Description: PRK102 76 Location: 152 2 719-152 3130 bp Feature: gene Location: 1523138-1524403 bp Feature: domain Description: umuC Location: 1523141-1524401 bp Feature: domain Description: umuC Location: 152 3141-152 4401 bp Feature: gene Location: 1704766-1705470 bp Feature: domain Description: Rve Location: 1704769-1705414 bp Feature: domain Description: Rve Location: 1704769-1705414 bp Feature: gene Location: 1705536-1705985 bp Feature: domain Description: PinE Location: 1705545-1705977 bp Feature: domain Description: PinE Location: 1705545-1705977 bp Feature: gene Location: 1707383-1708867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1707785-1708475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1707785-1708475 bp Feature: gene Location: 1708860-1709366 bp Feature: domain Description: PRK10276 Location: 1708950-1709361 bp Feature: domain Description: PRK102 76 Location: 1708950-1709361 bp Feature: gene Location: 1709368-1710633 bp Feature: domain Description: umuC Location: 1709371-1710631 bp Feature: domain Description: umuC Location: 1709371-1710631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)