myRT

myRT report for GCA_001033365.1_Kleb_pneu_CHS236_V1

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Seq: KQ089191.1 Klebsiella pneumoniae strain CHS236 genomic scaffold aeurU-supercont1.4, whole genome shotgun sequence (140079 bp)
Overview 1 RT 1: 82495-87489 bp Neighborhood of RT #1 [82495, 87491] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82495-83766 bp Feature: domain Description: umuC Location: 82498-83761 bp Feature: domain Description: umuC Location: 82498-83761 bp Feature: gene Location: 83766-84191 bp Feature: domain Description: PRK10276 Location: 83769-84177 bp Feature: domain Description: PRK1 0276 Location: 83769-841 77 bp Feature: gene Location: 84594-86081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84999-85689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84999-85689 bp Feature: gene Location: 86315-86545 bp Feature: gene Location: 87066-87491 bp Feature: domain Description: Antirestrict Location: 87201-87489 bp Feature: domain Description: Antirestrict Location: 87201 -87489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089188.1 Klebsiella pneumoniae strain CHS236 genomic scaffold aeurU-supercont1.1, whole genome shotgun sequence (3537535 bp)
Overview 1 RT 1: 883572-890055 bp Neighborhood of RT #1 [883572, 890057] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883572-884630 bp Feature: domain Description: YccC Location: 883578-884616 bp Feature: domain Description: YccC Location: 883578-884616 bp Feature: gene Location: 884729-885202 bp Feature: domain Description: PRK10016 Location: 884732-885191 bp Feature: domain Description: PRK10016 Location: 884732 -885191 bp Feature: gene Location: 885284-886771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885689-886379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885689-886379 bp Feature: gene Location: 887289-888452 bp Feature: domain Description: dacD Location: 887292-888447 bp Feature: domain Description: dacD Location: 8872 92 -888447 bp Feature: gene Location: 888633-890057 bp Feature: domain Description: SbcB Location: 888639-890055 bp Feature: domain Description: SbcB Location: 888639-890055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089189.1 Klebsiella pneumoniae strain CHS236 genomic scaffold aeurU-supercont1.2, whole genome shotgun sequence (1613796 bp)
Overview 1 RT 1: 587061-590468 bp 2 RT 2: 1029703-1035308 bp 3 RT 3: 1372808-1378226 bp 4 RT 4: 1556564-1562212 bp Neighborhood of RT #1 [587061, 590569] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029703, 1035334] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372808, 1378228] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1556564, 1562214] PinE RVT-GII PRK10276 umuC Feature: gene Location: 587061-587792 bp Feature: domain Description: Laminin_G_3 Location: 587382-587736 bp Feature: domain Description: Laminin_G_3 Location: 5873 82-58773 6 bp Feature: gene Location: 587789-587998 bp Feature: gene Location: 588448-589935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588853-589543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588853 -589543 bp Feature: gene Location: 590013-590252 bp Feature: gene Location: 590252-590569 bp Feature: domain Description: PRK10276 Location: 590258-590372 bp Feature: domain Description: PRK10276 Location: 590258-5903 72 bp Feature: domain Description: PRK10276 Location: 590399-590468 bp Feature: domain Description: PRK10276 Location: 5903 99-590468 bp Feature: gene Location: 1029703-1030266 bp Feature: domain Description: YbjK Location: 1029709-1030246 bp Feature: domain Description: YbjK Location: 1029709-103 0246 bp Feature: gene Location: 1030389-1031441 bp Feature: domain Description: int Location: 1030392-1031391 bp Feature: domain Description: int Location: 103 03 92-103 13 91 bp Feature: gene Location: 1031857-1033344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032262-1032952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 2262-103 2952 bp Feature: gene Location: 1033443-1034387 bp Feature: gene Location: 1034399-1035334 bp Feature: domain Description: Phage_CI_repr Location: 1034483-1034666 bp Feature: domain Description: Phage_CI_repr Location: 103 4483 -103 4666 bp Feature: domain Description: Phage_CI_repr Location: 1034795-1034987 bp Feature: domain Description: Phage_CI_repr Location: 103 4795-103 4987 bp Feature: domain Description: Phage_CI_C Location: 1035014-1035308 bp Feature: domain Description: Phage_CI_C Location: 103 5014-103 53 08 bp Feature: gene Location: 1372808-1373947 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372991-1373891 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 72991-13 73 891 bp Feature: gene Location: 1374118-1374360 bp Feature: domain Description: DinI Location: 1374169-1374349 bp Feature: domain Description: DinI Location: 13 74169-13 743 49 bp Feature: gene Location: 1374975-1376462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375380-1376070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 753 80-13 76070 bp Feature: gene Location: 1376541-1376960 bp Feature: domain Description: PRK10276 Location: 1376544-1376955 bp Feature: domain Description: PRK10276 Location: 13 76544-13 76955 bp Feature: gene Location: 1376963-1378228 bp Feature: domain Description: umuC Location: 1376966-1378226 bp Feature: domain Description: umuC Location: 13 76966-13 78226 bp Feature: gene Location: 1556564-1557051 bp Feature: gene Location: 1557117-1557566 bp Feature: domain Description: PinE Location: 1557126-1557558 bp Feature: domain Description: PinE Location: 1557126-1557558 bp Feature: gene Location: 1558961-1560448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559366-1560056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15593 66-1560056 bp Feature: gene Location: 1560441-1560947 bp Feature: domain Description: PRK10276 Location: 1560531-1560942 bp Feature: domain Description: PRK10276 Location: 156053 1-1560942 bp Feature: gene Location: 1560949-1562214 bp Feature: domain Description: umuC Location: 1560952-1562212 bp Feature: domain Description: umuC Location: 1560952-1562212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)